RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 UBE2J2Q8N2K1 259 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 FAM83FQ8NEG4 500 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 DDI1Q8WTU0 396 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 PAGE5Q96GU1 130 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 EBF4Q9BQW3 602 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 C9orf16Q9BUW7 83 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 NARFLQ9H6Q4 476 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 NHEJ1Q9H9Q4 299 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 FANCEQ9HB96 536 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 MRM3Q9HC36 420 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 SH2D2AQ9NP31 389 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 RPRD1BQ9NQG5 326 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 BATF3Q9NR55 127 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 PSME2Q9UL46 239 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 IGHV1OR21-1A0A087WYE8 117 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 NSG1A0A0A6YYJ2 146 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 C1orf232A0A0U1RR37 186 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 A0A1W2PQ67 120 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 CTAGE15A4D2H0 777 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 GOLGA8IPA6NC78 632 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 GOLGA8OA6NCC3 632 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 FAM47DPA6NHR8 397 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 GOLGA8NF8WBI6 632 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 H0YIV9 168 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 FLOT1O75955 427 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 SLC2A3P11169 496 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 S100A1P23297 94 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 CD1CP29017 333 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 HTR2BP41595 481 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 APOC4P55056 127 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 NUP107P57740 925 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 NCF4Q15080 339 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 HADHQ16836 314 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 HSP90AA4PQ58FG1 418 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 C1orf185Q5T7R7 199 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 ARCQ7LC44 396 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 TAS2R42Q7RTR8 314 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 CTAGE6Q86UF2 777 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 FTMTQ8N4E7 242 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 TPRX1Q8N7U7 411 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 C20orf203Q8NBC4 194 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 OPTNQ96CV9 577 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 CXorf40BQ96DE9 158 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 C19orf60Q96EN9 201 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 SLC35E1Q96K37 410 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 CNN2Q99439 309 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 ARHGDIGQ99819 225 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 FAIM2Q9BWQ8 316 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 C20orf85Q9H1P6 137 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 XKR8Q9H6D3 395 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 FOLH1BQ9HBA9 442 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 C8orf4Q9NR00 106 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 PAQR5Q9NXK6 330 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 CSDC2Q9Y534 153 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 NPTNQ9Y639 398 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 CDH10Q9Y6N8 788 aa2.85□□□□□ -1.95
GTF3C3-205ENST00000448087 CCDC171Q6TFL3 1326 aa2.84□□□□□ -1.95
GTF3C3-205ENST00000448087 PLEKHG1Q9ULL1 1385 aa2.84□□□□□ -1.95
GTF3C3-205ENST00000448087 LOC100653049A0A140TA62 436 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 NCF1BA6NI72 391 aaPredicted RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 PCP4L1A6NKN8 68 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 LRRIQ3A6PVS8 624 aaPredicted RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 NCF1CA8MVU1 366 aaPredicted RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 A8MXQ7 604 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 H0Y8G0 127 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 ZNF780AO75290 641 aaPredicted RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 KRT34O76011 436 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 MMP1P03956 469 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 IVLP07476 585 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 ANXA8P13928 327 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 PRKACAP17612 351 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 PRMT2P55345 433 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 VBP1P61758 197 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 UBE2IP63279 158 aaKnown RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 LIPEQ05469 1076 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 SMARCB1Q12824 385 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 OR5I1Q13606 314 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 COTL1Q14019 142 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 WDR43Q15061 677 aaKnown RBP eCLIP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 ANXA8L1Q5VT79 327 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 PRAMEF20Q5VT98 475 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 TIFABQ6ZNK6 161 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 SLC51BQ86UW2 128 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 COMTD1Q86VU5 262 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 SLC26A11Q86WA9 606 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 VRK2Q86Y07 508 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 PSTKQ8IV42 348 aaKnown RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 FAM104AQ969W3 186 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 TM4SF19Q96DZ7 209 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 ZNF641Q96N77 438 aaPredicted RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 CCDC77Q9BR77 488 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 SIKE1Q9BRV8 207 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 DRC3Q9H069 523 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 ZNF331Q9NQX6 463 aaPredicted RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 INIPQ9NRY2 104 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 TREM2Q9NZC2 230 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 BFARQ9NZS9 450 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 TMCO1Q9UM00 188 aa2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 RPL36Q9Y3U8 105 aaKnown RBP2.84□□□□□ -1.96
GTF3C3-205ENST00000448087 V9GY05 133 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms