RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TNFRSF1AP19438 455 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 PCMT1P22061 227 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 ACHEP22303 614 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 PTBP1P26599 531 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTPN3-204ENST00000446349 GAB1Q13480 694 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 RTL8BQ17RB0 113 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 OR6M1Q8NGM8 313 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 SUN5Q8TC36 379 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 DNAJA3Q96EY1 480 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 FUNDC2Q9BWH2 189 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 EHFQ9NZC4 300 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 DUSP13Q9UII6 198 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 M0QZ24 198 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 KLK10O43240 276 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 EPHA5P54756 1037 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 OR5M10Q6IEU7 315 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 GPR155Q7Z3F1 870 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF740Q8NDX6 193 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 ATF6BQ99941 703 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 LHPPQ9H008 270 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 PLEKHF2Q9H8W4 249 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 ATG4BQ9Y4P1 393 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 NINQ8N4C6 2090 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 C5orf67F2Z3F1 127 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 LY86O95711 162 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 GABRA1P14867 456 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 HTR2CP28335 458 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 PCBP4P57723 403 aaKnown RBP7.86□□□□□ -1.15
PTPN3-204ENST00000446349 HSF1Q00613 529 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 NAXDQ8IW45 347 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 QPCTLQ9NXS2 382 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 AK6Q9Y3D8 172 aaKnown RBP7.86□□□□□ -1.15
PTPN3-204ENST00000446349 MDFIC2A0A1B0GVS7 189 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 IMPA2O14732 288 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 MSTNO14793 375 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 DEGS1O15121 323 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 CD53P19397 219 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 EPHA1P21709 976 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 DDOSTP39656 456 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 FOXA1P55317 472 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 EGR3Q06889 387 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF616Q08AN1 781 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 PLA1AQ53H76 456 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 PRICKLE2Q7Z3G6 844 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 DOK4Q8TEW6 326 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 FOXQ1Q9C009 403 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 ERVMER34-1Q9H9K5 563 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 BCO1Q9HAY6 547 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 KLK4Q9Y5K2 254 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 NPIPA5A0A0B4J1W7 369 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 SLC35F4A4IF30 521 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 C21orf140B9A014 251 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 BCKDHBP21953 392 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF767PQ75MW2 155 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 OR52N1Q8NH53 320 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 HCSTQ9UBK5 93 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 TAF1LQ8IZX4 1826 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 PRRT4C9JH25 899 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 TSPAN15O95858 294 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 SLC19A1P41440 591 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 GSK3AP49840 483 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 FOXC1Q12948 553 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 RAB6CQ53S08 254 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 C6orf183Q5T699 404 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 FAM111BQ6SJ93 734 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 HMGN2P46Q86SG4 172 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 RAB6CQ9H0N0 254 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 OR51B6Q9H340 312 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 HRASLSQ9HDD0 168 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 NECAP2Q9NVZ3 263 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 SCN1AP35498 2009 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 DEFA4P12838 97 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 TBPP20226 339 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 LRRC37A5PQ49AS3 106 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 CCDC58Q4VC31 144 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 AADACL3Q5VUY0 350 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 SAXO2Q658L1 398 aa7.86□□□□□ -1.15
PTPN3-204ENST00000446349 H1FXQ92522 213 aaKnown RBP7.86□□□□□ -1.15
PTPN3-204ENST00000446349 NKX1-2Q9UD57 310 aaPredicted RBP7.86□□□□□ -1.15
PTPN3-204ENST00000446349 SLC22A20A6NK97 555 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 HSBP1L1C9JCN9 74 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 ENSAO43768 121 aaKnown RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 GPX2P18283 190 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 HOXA1P49639 335 aaPredicted RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 ALKBH1Q13686 389 aaKnown RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 RBMS2Q15434 407 aaKnown RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 HAGHLQ6PII5 290 aaPredicted RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 PRSS35Q8N3Z0 413 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 RBMXL3Q8N7X1 1067 aaKnown RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 OR13C2Q8NGS9 318 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 EMG1Q92979 244 aaKnown RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 FAM96BQ9Y3D0 163 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 RBBP6Q7Z6E9 1792 aaKnown RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 TRGV8A0A0C4DH27 118 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 PLPP1O14494 284 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 LGI1O95970 557 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 MT-CO3P00414 261 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 CRYBA1P05813 215 aa7.85□□□□□ -1.15
PTPN3-204ENST00000446349 C21orf33P30042 268 aaPredicted RBP7.85□□□□□ -1.15
PTPN3-204ENST00000446349 MTNR1BP49286 362 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms