RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 YTHDF3Q7Z739 585 aaKnown RBP16.23■□□□□ 0.19
CCDC188-202ENST00000444532 CDK20Q8IZL9 346 aa16.23■□□□□ 0.19
CCDC188-202ENST00000444532 FBXL14Q8N1E6 418 aa16.23■□□□□ 0.19
CCDC188-202ENST00000444532 FAM156AQ8NDB6 213 aa16.23■□□□□ 0.19
CCDC188-202ENST00000444532 NMNAT1Q9HAN9 279 aaPredicted RBP16.23■□□□□ 0.19
CCDC188-202ENST00000444532 DLL4Q9NR61 685 aa16.23■□□□□ 0.19
CCDC188-202ENST00000444532 MOKQ9UQ07 419 aa16.23■□□□□ 0.19
CCDC188-202ENST00000444532 HIF3AQ9Y2N7 669 aa16.23■□□□□ 0.19
CCDC188-202ENST00000444532 FAM32AQ9Y421 112 aaKnown RBP16.23■□□□□ 0.19
CCDC188-202ENST00000444532 ATP23Q9Y6H3 246 aa16.23■□□□□ 0.19
CCDC188-202ENST00000444532 NPIPB13A6NJU9 1138 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 NPIPB4C9JG80 1138 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 MCIDASD6RGH6 385 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 ENTPD5O75356 428 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 IGHG1P01857 330 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 CRYAAP02489 173 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 PGA4P0DJD7 388 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 PGA3P0DJD8 388 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 RHCEP18577 417 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 MELKQ14680 651 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 LAPTM4AQ15012 233 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 HIST3H3Q16695 136 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 ANKDD1AQ495B1 522 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 LRFN4Q6PJG9 635 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 B3GLCTQ6Y288 498 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 ZNF730Q6ZMV8 503 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 MBOAT2Q6ZWT7 520 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 RRM2BQ7LG56 351 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 PIWIL3Q7Z3Z3 882 aaKnown RBP16.22■□□□□ 0.19
CCDC188-202ENST00000444532 TSEN54Q7Z6J9 526 aaKnown RBP16.22■□□□□ 0.19
CCDC188-202ENST00000444532 NRMQ8IXM6 262 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 DEFB107AQ8IZN7 70 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 CCDC197Q8NCU1 140 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 RBM15BQ8NDT2 890 aaKnown RBP16.22■□□□□ 0.19
CCDC188-202ENST00000444532 NSL1Q96IY1 281 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 C7orf34Q96L11 122 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 FOXB1Q99853 325 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 CBLN4Q9NTU7 201 aa16.22■□□□□ 0.19
CCDC188-202ENST00000444532 STX18Q9P2W9 335 aaKnown RBP16.22■□□□□ 0.19
CCDC188-202ENST00000444532 PLCE1Q9P212 2302 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 A0A087WUU8 490 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 ATP6V1G2-DDX39BF2Z307 99 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 SEC14L2O76054 403 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 CECR9P0C854 216 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 SAGP10523 405 aaPredicted RBP16.21■□□□□ 0.19
CCDC188-202ENST00000444532 MAKP20794 623 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 APOBEC3AP31941 199 aaPredicted RBP16.21■□□□□ 0.19
CCDC188-202ENST00000444532 CAPZA2P47755 286 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 CLRN1P58418 232 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 LSM11P83369 360 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC188-202ENST00000444532 NAAAQ02083 359 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 TAF11Q15544 211 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 MUC15Q8N387 334 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 IL17RDQ8NFM7 739 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 MOSPD2Q8NHP6 518 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 ASB10Q8WXI3 467 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 PYURFQ96I23 114 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 SEPHS2Q99611 448 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 BDH2Q9BUT1 245 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 MRPL13Q9BYD1 178 aaKnown RBP16.21■□□□□ 0.19
CCDC188-202ENST00000444532 DENND2DQ9H6A0 471 aaPredicted RBP16.21■□□□□ 0.19
CCDC188-202ENST00000444532 B3GNT2Q9NY97 397 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 NDUFAF4Q9P032 175 aa16.21■□□□□ 0.19
CCDC188-202ENST00000444532 FLNAP21333 2647 aaKnown RBP16.21■□□□□ 0.19
CCDC188-202ENST00000444532 A0A1W2PRQ8 180 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 B2RBV5 119 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 DHHO43323 396 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 H1F0P07305 194 aaKnown RBP16.2■□□□□ 0.18
CCDC188-202ENST00000444532 QDPRP09417 244 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 ACADSP16219 412 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 ITGA2P17301 1181 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 CDKN1AP38936 164 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 SLC9A3P48764 834 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 DGCR6Q14129 220 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 ETFDHQ16134 617 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 ALG10Q5BKT4 473 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 ARMC4Q5T2S8 1044 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 TBPL2Q6SJ96 375 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 TMPRSS11FQ6ZWK6 438 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 OAFQ86UD1 273 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 MDP1Q86V88 176 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 FAM86B1Q8N7N1 296 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 OR4F15Q8NGB8 312 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 SLC7A13Q8TCU3 470 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 NANOS1Q8WY41 292 aaKnown RBP16.2■□□□□ 0.18
CCDC188-202ENST00000444532 Q96MF0 132 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 TXNIPQ9H3M7 391 aa16.2■□□□□ 0.18
CCDC188-202ENST00000444532 USF3Q68DE3 2245 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 ZNF503-AS2A6NEH8 195 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 EFCAB9A8MZ26 197 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 ARPC2O15144 300 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 TRMUO75648 421 aaKnown RBP16.19■□□□□ 0.18
CCDC188-202ENST00000444532 HLA-HP01893 362 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 CD79AP11912 226 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 B4GALT1P15291 398 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 MSX2P35548 267 aaPredicted RBP16.19■□□□□ 0.18
CCDC188-202ENST00000444532 IDH3GP51553 393 aaPredicted RBP16.19■□□□□ 0.18
CCDC188-202ENST00000444532 VLDLRP98155 873 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 RUNX1T1Q06455 604 aa16.19■□□□□ 0.18
CCDC188-202ENST00000444532 GSG1Q2KHT4 349 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms