RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZNF433Q8N7K0 673 aaPredicted RBP7.71□□□□□ -1.17
USP6NL-203ENST00000443016 PAPD5Q8NDF8 572 aaKnown RBP7.71□□□□□ -1.17
USP6NL-203ENST00000443016 KBTBD8Q8NFY9 601 aa7.71□□□□□ -1.17
USP6NL-203ENST00000443016 GPR32P1Q8NGA4 272 aa7.71□□□□□ -1.17
USP6NL-203ENST00000443016 SMAP2Q8WU79 429 aaPredicted RBP7.71□□□□□ -1.17
USP6NL-203ENST00000443016 TRMT61AQ96FX7 289 aaKnown RBP7.71□□□□□ -1.17
USP6NL-203ENST00000443016 ARHGDIGQ99819 225 aa7.71□□□□□ -1.17
USP6NL-203ENST00000443016 CHID1Q9BWS9 393 aa7.71□□□□□ -1.17
USP6NL-203ENST00000443016 POLR2J2Q9GZM3 115 aaKnown RBP7.71□□□□□ -1.17
USP6NL-203ENST00000443016 POLR2J3Q9H1A7 115 aaKnown RBP7.71□□□□□ -1.17
USP6NL-203ENST00000443016 IL1RAPQ9NPH3 570 aa7.71□□□□□ -1.17
USP6NL-203ENST00000443016 FAIMQ9NVQ4 179 aa7.71□□□□□ -1.17
USP6NL-203ENST00000443016 RPS6KB2Q9UBS0 482 aa7.71□□□□□ -1.17
USP6NL-203ENST00000443016 DPRXA6NFQ7 191 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 A8MVM7 634 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 hCG_2039718K7EN88 272 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 ABCD4O14678 606 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 AKR7A3O95154 331 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 BAG2O95816 211 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 PRG2P13727 222 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 CDH2P19022 906 aaPredicted RBP7.71□□□□□ -1.18
USP6NL-203ENST00000443016 GTF2E2P29084 291 aaKnown RBP7.71□□□□□ -1.18
USP6NL-203ENST00000443016 ACAA2P42765 397 aaKnown RBP7.71□□□□□ -1.18
USP6NL-203ENST00000443016 MAGEA2P43356 314 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 TGFBR3Q03167 851 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 TMED1Q13445 227 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 TMEM108Q6UXF1 575 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 PIWIL3Q7Z3Z3 882 aaKnown RBP7.71□□□□□ -1.18
USP6NL-203ENST00000443016 TMEM99Q8N816 258 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 NEUROG1Q92886 237 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 RASSF4Q9H2L5 321 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 CNTD2Q9H8S5 307 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 RNPEPL1Q9HAU8 725 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 CISD1Q9NZ45 108 aaKnown RBP7.71□□□□□ -1.18
USP6NL-203ENST00000443016 MALT1Q9UDY8 824 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 FLVCR1Q9Y5Y0 555 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 ENPP4Q9Y6X5 453 aa7.71□□□□□ -1.18
USP6NL-203ENST00000443016 SONP18583 2426 aaKnown RBP7.71□□□□□ -1.18
USP6NL-203ENST00000443016 A0A087X0M5 115 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 A0A1B0GX30 115 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 A0A1W2PR80 420 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 FMO6PO60774 539 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 CST1P01037 141 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SEMG1P04279 462 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SOD3P08294 240 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 NTF4P34130 210 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 OR1E2P47887 323 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ZNF83P51522 516 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SMIM11AP58511 58 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
USP6NL-203ENST00000443016 HOXC5Q00444 222 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 LTBQ06643 244 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 GK3PQ14409 553 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SLC17A1Q14916 467 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ZNF672Q499Z4 452 aaPredicted RBP7.7□□□□□ -1.18
USP6NL-203ENST00000443016 KLHL17Q6TDP4 642 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 PQLC1Q8N2U9 271 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SLC25A36Q96CQ1 311 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 PRRC1Q96M27 445 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SELENONQ9NZV5 590 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 STX18Q9P2W9 335 aaKnown RBP7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ALPK2Q86TB3 2170 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 LIPT2A6NK58 231 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ELOA3DA6NLF2 546 aaPredicted RBP7.7□□□□□ -1.18
USP6NL-203ENST00000443016 AHSA1O95433 338 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ATP6V1G2O95670 118 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 TNFRSF1BP20333 461 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ARHGDIAP52565 204 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 CDH11P55287 796 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 TAS2R41P59536 307 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 VLDLRP98155 873 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ATP6AP1Q15904 470 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ELOA3BQ3SY89 546 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 C1orf140Q5VVS0 124 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 KLHL24Q6TFL4 600 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 AAED1Q7RTV5 226 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 CIARTQ8N365 385 aaPredicted RBP7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ZNF511Q8NB15 262 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ELOA3Q8NG57 546 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 OR9K2Q8NGE7 335 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SLCO4A1Q96BD0 722 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 C3orf49Q96BT1 292 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 COX4I2Q96KJ9 171 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 C1QTNF6Q9BXI9 259 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 TRIM2Q9C040 744 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 REEP1Q9H902 201 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 TMEM27Q9HBJ8 222 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 SLC7A10Q9NS82 523 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 ZNF701Q9NV72 531 aaPredicted RBP7.7□□□□□ -1.18
USP6NL-203ENST00000443016 DNAJB9Q9UBS3 223 aa7.7□□□□□ -1.18
USP6NL-203ENST00000443016 FAM25EA8MYX2 175 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 H3BNX3 289 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 M0R1B8 84 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 E2F6O75461 281 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 VAMP5O95183 116 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 MT-ND1P03886 318 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 ANPEPP15144 967 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 PTAFRP25105 342 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 CDKN1AP38936 164 aa7.69□□□□□ -1.18
USP6NL-203ENST00000443016 SPIBQ01892 262 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms