RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ENKD1Q9H0I2 346 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLA2Q9H6Q3 261 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 HEXA-AS1Q9H8Q6 139 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 RNF121Q9H920 327 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 C19orf53Q9UNZ5 99 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 COL5A1P20908 1838 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 CENPVL1A0A0U1RR11 272 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF726A6NNF4 738 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 BHLHE40O14503 412 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ICOSLGO75144 302 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 UBL4AP11441 157 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 FPR3P25089 353 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 APEX1P27695 318 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 CAV3P56539 151 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 BDH1Q02338 343 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 DUSP8Q13202 625 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 POU4F3Q15319 338 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 TBRG1Q3YBR2 411 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC36A2Q495M3 483 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF468Q5VIY5 522 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 LYPD8Q6UX82 237 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 PLEKHM3Q6ZWE6 761 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 BBS1Q8NFJ9 593 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ADAMTS17Q8TE56 1095 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 CALHM2Q9HA72 323 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 ASB6Q9NWX5 421 aa6.66□□□□□ -1.34
CDC42BPA-208ENST00000442054 CACNA1CQ13936 2221 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 A0A0G2JPF8 293 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 HNRNPCL2B2RXH8 293 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 HNRNPCL3B7ZW38 293 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 TRIM3O75382 744 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 CT62P0C5K7 136 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 HNRNPCL4P0DMR1 293 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 PLA2G2AP14555 144 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 ENPP1P22413 925 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC6A1P30531 599 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 CARD18P57730 90 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 FRRS1Q6ZNA5 592 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 ASCC1Q8N9N2 400 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR4M2Q8NGB6 313 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR52N1Q8NH53 320 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 ELP5Q8TE02 316 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 RNFT2Q96EX2 444 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 NAA11Q9BSU3 229 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 QRSL1Q9H0R6 528 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 C12orf49Q9H741 205 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 RBFOX1Q9NWB1 397 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 KCNE5Q9UJ90 142 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 NAV2Q8IVL1 2488 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 GXYLT2A0PJZ3 443 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 FRG2CA6NGY1 282 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 SLC22A20A6NK97 555 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 AKAP8O43823 692 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 NME2P1O60361 137 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 HCN1O60741 890 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 DRD5P21918 477 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 NME2P22392 152 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 GZMKP49863 264 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 CEP78Q5JTW2 689 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 HBMQ6B0K9 141 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF620Q6ZNG0 422 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 ZNF550Q7Z398 422 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 RANBP3LQ86VV4 465 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 MEX3DQ86XN8 651 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 MISPQ8IVT2 679 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 NKAIN4Q8IVV8 208 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 ST6GALNAC3Q8NDV1 305 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 OR6N1Q8NGY5 312 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 CAPSLQ8WWF8 208 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 GATAD2BQ8WXI9 593 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 PGLYRP3Q96LB9 341 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 MARCH7Q9H992 704 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 MED17Q9NVC6 651 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 TVP23BQ9NYZ1 205 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 NUFIP1Q9UHK0 495 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 PROCRQ9UNN8 238 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 NTNG1Q9Y2I2 539 aa6.65□□□□□ -1.34
CDC42BPA-208ENST00000442054 A8MV72 311 aaPredicted RBP6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 OR10H3O60404 316 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 ZNF780AO75290 641 aaPredicted RBP6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 FCGR2AP12318 317 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 HTR1FP30939 366 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 EVI2BP34910 448 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 ATP12AP54707 1039 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC37A1P57057 533 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 DEFA1P59665 94 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 DEFA3P59666 94 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 CBFBQ13951 182 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 C6orf183Q5T699 404 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 SMARCD3Q6STE5 483 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 RPTNQ6XPR3 784 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 DEF8Q6ZN54 512 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 C9orf40Q8IXQ3 194 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 GPR137Q96N19 417 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 SLC22A4Q9H015 551 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 ISG20L2Q9H9L3 353 aaKnown RBP6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 EXOSC1Q9Y3B2 195 aaKnown RBP6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 VPS13AQ96RL7 3174 aa6.65□□□□□ -1.35
CDC42BPA-208ENST00000442054 USP24Q9UPU5 2620 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms