RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 OR7A10O76100 309 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 F12P00748 615 aaPredicted RBP16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 OR4A8P0C604 315 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 PGA4P0DJD7 388 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 PGA3P0DJD8 388 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 ZNF14P17017 642 aaPredicted RBP16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 FUT1P19526 365 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 FUT4P22083 530 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 PCSK6P29122 969 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 RPL18Q07020 188 aaKnown RBP16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 NPRL3Q12980 569 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 MELKQ14680 651 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 HIST3H3Q16695 136 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 NANOGNBQ7Z5D8 188 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 IL17RDQ8NFM7 739 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 SLC25A44Q96H78 314 aaPredicted RBP16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 SEPHS2Q99611 448 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 MALRD1Q5VYJ5 2156 aa16.38■□□□□ 0.21
HMGB3P22-201ENST00000442010 B9A039 149 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 BLOC1S5-TXNDC5H3BN57 136 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 NME4O00746 187 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 LY6HO94772 140 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 HIST1H2ABP04908 130 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 UMPSP11172 480 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 THBS4P35443 961 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 CAPZA2P47755 286 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 LIPEQ05469 1076 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 GSG1Q2KHT4 349 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 CLEC2AQ6UVW9 174 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 HACD2Q6Y1H2 254 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 HIST3H2AQ7L7L0 130 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 NANOS1Q8WY41 292 aaKnown RBP16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 HIST1H2ACQ93077 130 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 ZNF566Q969W8 418 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 SGTBQ96EQ0 304 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 MS4A3Q96HJ5 214 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 TPD52L3Q96J77 140 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 PRRC1Q96M27 445 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 SORCS2Q96PQ0 1159 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 MRPL13Q9BYD1 178 aaKnown RBP16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 MYLK2Q9H1R3 596 aa16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 DENND2DQ9H6A0 471 aaPredicted RBP16.37■□□□□ 0.21
HMGB3P22-201ENST00000442010 TMEM129A0AVI4 362 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 BCL10O95999 233 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 ZNF35P13682 527 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 SNRPD2P62316 118 aaKnown RBP16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 LSM11P83369 360 aaKnown RBP eCLIP16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 RUNX1T1Q06455 604 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 PIGFQ07326 219 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 VHLLQ6RSH7 139 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 PIWIL3Q7Z3Z3 882 aaKnown RBP16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 VTCN1Q7Z7D3 282 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 SKA3Q8IX90 412 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 FGFBP3Q8TAT2 258 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 C10orf105Q8TEF2 133 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 HOPXQ9BPY8 73 aaPredicted RBP16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 SNX13Q9Y5W8 968 aa16.36■□□□□ 0.21
HMGB3P22-201ENST00000442010 CXCR6O00574 342 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 DHHO43323 396 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 CD5LO43866 347 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 GPRIN2O60269 458 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 F13BP05160 661 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 CD79AP11912 226 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 SLC25A16P16260 332 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 AQP2P41181 271 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 GIPRP48546 466 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 SLC7A2P52569 658 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 ZNF133P52736 654 aaPredicted RBP16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 RAB1AP62820 205 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 LOXL1Q08397 574 aaPredicted RBP16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 ST3GAL3Q11203 375 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 CBLL1Q75N03 491 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 PRIMA1Q86XR5 153 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 ZNF584Q8IVC4 421 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 SLC22A24Q8N4F4 322 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 ASB10Q8WXI3 467 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 FAM168AQ92567 244 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 DOK1Q99704 481 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 EFCAB1Q9HAE3 211 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 MAN2C1Q9NTJ4 1040 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 TMEM38BQ9NVV0 291 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 MED31Q9Y3C7 131 aa16.35■□□□□ 0.21
HMGB3P22-201ENST00000442010 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 CENPBD1B2RD01 187 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 FFAR1O14842 300 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 PIP5K1CO60331 668 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 UBL3O95164 117 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 IGHG1P01857 330 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 IGFBP1P08833 259 aaPredicted RBP16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 QDPRP09417 244 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 CSF3P09919 207 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 NPR2P20594 1047 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 NR4A1P22736 598 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 PTDSS1P48651 473 aaKnown RBP16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 GSK3BP49841 420 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 PPOXP50336 477 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 SEC24CP53992 1094 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 PPP2R2BQ00005 443 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 MSMPQ1L6U9 139 aa16.34■□□□□ 0.21
HMGB3P22-201ENST00000442010 ARMC4Q5T2S8 1044 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms