RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SLC22A11Q9NSA0 550 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 SPHK1Q9NYA1 384 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 OR6C76A6NM76 312 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 SPI1P17947 270 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 MNDAP41218 407 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 RAB28P51157 221 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 SEC13P55735 322 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 POLR2GP62487 172 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHOX2-203ENST00000441443 BLOC1S1P78537 153 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 SWI5Q1ZZU3 235 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 GLT8D1Q68CQ7 371 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 TMEM71Q6P5X7 295 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 LRRTM1Q86UE6 522 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 TMIEQ8NEW7 156 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 SMARCD2Q92925 531 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 ASB16Q96NS5 453 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 MBNL1Q9NR56 388 aaKnown RBP18.48■□□□□ 0.55
SHOX2-203ENST00000441443 SPTBN5Q9NRC6 3674 aaKnown RBP18.48■□□□□ 0.55
SHOX2-203ENST00000441443 TMEM200CA6NKL6 621 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 BCL2L11O43521 198 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 CRYBA1P05813 215 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 GGTLC2Q14390 218 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 STEAP1BQ6NZ63 245 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 ZNF765Q7L2R6 523 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 RAB42Q8N4Z0 105 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 OR1M1Q8NGA1 313 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 OR5AK2Q8NH90 309 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 TSSK2Q96PF2 358 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 TMEM231Q9H6L2 316 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 TAS2R8Q9NYW2 309 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 SERGEFQ9UGK8 458 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 GPN3Q9UHW5 284 aaPredicted RBP18.47■□□□□ 0.55
SHOX2-203ENST00000441443 PQLC2LA1A4F0 135 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 OR14I1A6ND48 311 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 M0QYG6 137 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 CTAG2O75638 210 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 GPM6BQ13491 265 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 GAS6Q14393 721 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 GAB4Q2WGN9 574 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 NKAIN2Q5VXU1 208 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 LURAP1LQ8IV03 231 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 OR51A4Q8NGJ6 313 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 OR1J2Q8NGS2 313 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 SFT2D1Q8WV19 159 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 ULBP3Q9BZM4 244 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 TLNRD1Q9H1K6 362 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 FRRS1LQ9P0K9 344 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 STEAP1Q9UHE8 339 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 TNFSF18Q9UNG2 199 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 A0A1B0GTQ1 180 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 TMEM82A0PJX8 343 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 TMEM72A0PK05 275 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 C1QTNF3-AMACRE9PGA6 284 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 DLSTP36957 453 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 ALG10BQ5I7T1 473 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 FAM209BQ5JX69 171 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 LIN54Q6MZP7 749 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 PSRC1Q6PGN9 363 aaPredicted RBP18.47■□□□□ 0.55
SHOX2-203ENST00000441443 CRB3Q9BUF7 120 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 MRI1Q9BV20 369 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 TMEM74BQ9NUR3 256 aa18.47■□□□□ 0.55
SHOX2-203ENST00000441443 A0A0B4J2E0 115 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 A0A1B0GX12 115 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 A0A1W2PP55 124 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 RNF222A6NCQ9 220 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 F5H0A9 414 aaPredicted RBP18.46■□□□□ 0.55
SHOX2-203ENST00000441443 SULT1C2O00338 296 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 FADS1O60427 444 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 EIF3GO75821 320 aaKnown RBP eCLIP18.46■□□□□ 0.55
SHOX2-203ENST00000441443 ACTL6AO96019 429 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 ZNF888P0CJ79 500 aaPredicted RBP18.46■□□□□ 0.55
SHOX2-203ENST00000441443 RPS4Y1P22090 263 aaKnown RBP18.46■□□□□ 0.55
SHOX2-203ENST00000441443 H3F3CQ6NXT2 135 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 SPAG16Q8N0X2 631 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 NPEPL1Q8NDH3 523 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 GLYATL2Q8WU03 294 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 MKL2Q9ULH7 1088 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 KLHDC2Q9Y2U9 406 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 NDUFB2O95178 105 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 NPBWR1P48145 328 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 CDK3Q00526 305 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 LIPNQ5VXI9 398 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 C11orf87Q6NUJ2 197 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 ZNF227Q86WZ6 799 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 ZCCHC10Q8TBK6 192 aa18.46■□□□□ 0.55
SHOX2-203ENST00000441443 CDV3Q9UKY7 258 aaKnown RBP18.46■□□□□ 0.55
SHOX2-203ENST00000441443 RORAP35398 523 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 ATP1B3P54709 279 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 OR2L3Q8NG85 312 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 OR4K14Q8NGD5 310 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 PAQR8Q8TEZ7 354 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 COX14Q96I36 57 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 COMMD9Q9P000 198 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 ZNF629Q9UEG4 869 aaPredicted RBP18.45■□□□□ 0.54
SHOX2-203ENST00000441443 TRAV20A0A0B4J274 112 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 FAM25EA8MYX2 175 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 PMS2P2O95744 297 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 EN2P19622 333 aaPredicted RBP18.45■□□□□ 0.54
SHOX2-203ENST00000441443 PRSS3P35030 304 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 CD96P40200 585 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms