RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 RAB7AP51149 207 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 CDH11P55287 796 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 MS4A2Q01362 244 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 ARHGAP1Q07960 439 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 SNRNP35Q16560 246 aaKnown RBP9.52□□□□□ -0.88
SYNE2-206ENST00000441438 TBC1D3GQ6DHY5 549 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 TMEM225Q6GV28 225 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 FAHD1Q6P587 224 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 UGT2A3Q6UWM9 527 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 SMIM20Q8N5G0 67 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 REPS2Q8NFH8 660 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 OR2Z1Q8NG97 314 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 OR7G2Q8NG99 324 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 COQ8AQ8NI60 647 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 DCAKDQ8WVC6 231 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 ACOT12Q8WYK0 555 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 VPREB3Q9UKI3 123 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 EXO1Q9UQ84 846 aaKnown RBP9.52□□□□□ -0.88
SYNE2-206ENST00000441438 RBM7Q9Y580 266 aaKnown RBP9.52□□□□□ -0.88
SYNE2-206ENST00000441438 LOC102723971A0A1B0GUV8 181 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 FMO4P31512 558 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 IRX4P78413 519 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 ACSM2AQ08AH3 577 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 RAB39AQ14964 217 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM176BQ3YBM2 270 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM196Q5HYL7 178 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 C1orf220Q5T0J3 134 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 RSBN1Q5VWQ0 802 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-206ENST00000441438 ACSM2BQ68CK6 577 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM42Q69YG0 159 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 OR4F3Q6IEY1 312 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 TMEM130Q8N3G9 435 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 GNPDA2Q8TDQ7 276 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 CXorf40BQ96DE9 158 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 NOL4LQ96MY1 436 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-206ENST00000441438 GPR78Q96P69 363 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 AMBRA1Q9C0C7 1298 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 GPR173Q9NS66 373 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF221Q9UK13 617 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 AMDHD2Q9Y303 409 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 DOCK5Q9H7D0 1870 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 SIAH2O43255 324 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 OR10J4P0C629 311 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 FTH1P19P0C7X4 201 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 RRAS2P62070 204 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-206ENST00000441438 CEACAM20Q6UY09 585 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 VN1R5Q7Z5H4 357 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 SLC38A9Q8NBW4 561 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 OR14K1Q8NGZ2 314 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 LYPD6BQ8NI32 183 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 CLEC4CQ8WTT0 213 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 RAB3CQ96E17 227 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 MRPS26Q9BYN8 205 aaKnown RBP9.52□□□□□ -0.89
SYNE2-206ENST00000441438 RSL24D1Q9UHA3 163 aaKnown RBP9.52□□□□□ -0.89
SYNE2-206ENST00000441438 PURGQ9UJV8 347 aaKnown RBP9.52□□□□□ -0.89
SYNE2-206ENST00000441438 SH2B3Q9UQQ2 575 aa9.52□□□□□ -0.89
SYNE2-206ENST00000441438 A0A0G2JND7 137 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF780AO75290 641 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-206ENST00000441438 PIAS1O75925 651 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 SMIM18P0DKX4 95 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 S100GP29377 79 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ACLYP53396 1101 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 STXBP1P61764 594 aaKnown RBP9.51□□□□□ -0.89
SYNE2-206ENST00000441438 RIMKLAQ8IXN7 391 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF738Q8NE65 137 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 KBTBD8Q8NFY9 601 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ABHD4Q8TB40 342 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 SLC35B2Q8TB61 432 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ZBTB45Q96K62 511 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-206ENST00000441438 SCUBE2Q9NQ36 999 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 TMLHEQ9NVH6 421 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ZNFX1Q9P2E3 1918 aaKnown RBP9.51□□□□□ -0.89
SYNE2-206ENST00000441438 OR6C68A6NDL8 312 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 FAM90A27PA6NNH2 459 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 MPTX1A8MV57 137 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 CDC14BO60729 498 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ATP1B2P14415 290 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-206ENST00000441438 FBLP22087 321 aaKnown RBP9.51□□□□□ -0.89
SYNE2-206ENST00000441438 PLP1P60201 277 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 TATDN3Q17R31 274 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 LY6G6FQ5SQ64 297 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ATAD3CQ5T2N8 411 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ADGRE4PQ86SQ3 457 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 SLC34A3Q8N130 599 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ITFG1Q8TB96 612 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 FAM110BQ8TC76 370 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 CMTM7Q96FZ5 175 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 COL21A1Q96P44 957 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 ALG9Q9H6U8 611 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 SPAG4Q9NPE6 437 aa9.51□□□□□ -0.89
SYNE2-206ENST00000441438 TANC1Q9C0D5 1861 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 LTBP2Q14767 1821 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 A0A1B0GUS0 222 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 F5H768 121 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 SLC19A2O60779 497 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF217O75362 1048 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 FCN3O75636 299 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 GPR75O95800 540 aa9.5□□□□□ -0.89
SYNE2-206ENST00000441438 C1GALT1C1LP0DN25 315 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms