RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 BDP1A6H8Y1 2624 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 CFAP54Q96N23 3096 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 A0A1W2PS29 197 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ERI3O43414 337 aaKnown RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 SLC25A12O75746 678 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 PMS2P2O95744 297 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 CRYBA1P05813 215 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 AKAIN1P0CW23 69 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 SMIM6P0DI80 62 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 HTR2AP28223 471 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 BDKRB2P30411 391 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 PSMB10P40306 273 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 TNFRSF4P43489 277 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 GPR143P51810 404 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 SRSF4Q08170 494 aaKnown RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 GGTLC2Q14390 218 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ABHD17CQ6PCB6 329 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 LSRQ86X29 649 aaPredicted RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 OR2L13Q8N349 312 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ACOT4Q8N9L9 421 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 OR2L5Q8NG80 312 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 OR9A2Q8NGT5 310 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 NANPQ8TBE9 248 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 DUSP19Q8WTR2 217 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 CCDC107Q8WV48 283 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 MRGPRX1Q96LB2 322 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ZNF75AQ96N20 296 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 CHST6Q9GZX3 395 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 CCDC86Q9H6F5 360 aaKnown RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 PRDM7Q9NQW5 492 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 SPHK1Q9NYA1 384 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 KCNK6Q9Y257 313 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 MED31Q9Y3C7 131 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 WDR45Q9Y484 360 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 TRPM6Q9BX84 2022 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 TRAV27A0A087WT01 109 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 IGKV1-8A0A0C4DH67 115 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 OR5H14A6NHG9 310 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 GNB5O14775 395 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 ADH1BP00325 375 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 HEXAP06865 529 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 MELTFP08582 738 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 BCL6P41182 706 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 DUSP8Q13202 625 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 SGCGQ13326 291 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 ARHGAP11AQ6P4F7 1023 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 FAM122BQ7Z309 247 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 SKA3Q8IX90 412 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 OR51S1Q8NGJ8 323 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 OR51A7Q8NH64 312 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 GABRG3Q99928 467 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 VRK1Q99986 396 aaPredicted RBP10.84□□□□□ -0.67
LTBR-203ENST00000441074 ZNF251Q9BRH9 671 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 ADAT1Q9BUB4 502 aaKnown RBP10.84□□□□□ -0.67
LTBR-203ENST00000441074 ZNF471Q9BX82 626 aaPredicted RBP10.84□□□□□ -0.67
LTBR-203ENST00000441074 SLC17A9Q9BYT1 436 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 KLHL31Q9H511 634 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 EXO5Q9H790 373 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 SERTAD3Q9UJW9 196 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 MKL2Q9ULH7 1088 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 ZNF780BQ9Y6R6 833 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 TICRRQ7Z2Z1 1910 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 TRAV20A0A0B4J274 112 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 SGCEO43556 437 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 RNGTTO60942 597 aaKnown RBP10.84□□□□□ -0.67
LTBR-203ENST00000441074 S100A8P05109 93 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 THBS1P07996 1170 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 TMIGD3P0DMS9 266 aaPredicted RBP10.84□□□□□ -0.67
LTBR-203ENST00000441074 NAA10P41227 235 aaPredicted RBP10.84□□□□□ -0.67
LTBR-203ENST00000441074 BLOC1S1P78537 153 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 AMZ1Q400G9 498 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 C3orf33Q6P1S2 294 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 STAC2Q6ZMT1 411 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 RD3Q7Z3Z2 195 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 BOLLQ8N9W6 283 aaKnown RBP10.84□□□□□ -0.67
LTBR-203ENST00000441074 SLC16A11Q8NCK7 471 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 SDR9C7Q8NEX9 313 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 OR2A1Q8NGT9 310 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 OR2L8Q8NGY9 312 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 CDS1Q92903 461 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 SLITRK2Q9H156 845 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 IL21RQ9HBE5 538 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 MRPS30Q9NP92 439 aaKnown RBP10.84□□□□□ -0.67
LTBR-203ENST00000441074 GSN-AS1Q9NRJ2 163 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 OR10H1Q9Y4A9 318 aa10.84□□□□□ -0.67
LTBR-203ENST00000441074 TP53BP1Q12888 1972 aaPredicted RBP10.83□□□□□ -0.68
LTBR-203ENST00000441074 TCRBV21S2A2A0A5A6 115 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 MEX3AA1L020 520 aaKnown RBP10.83□□□□□ -0.68
LTBR-203ENST00000441074 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 OR52A4PA6NMU1 304 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 FGF16O43320 207 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 ITGB2P05107 769 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 GTF2F2P13984 249 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 SLC6A6P31641 620 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 CSF2RBP32927 897 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 MAGEB1P43366 347 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 SCAND1P57086 179 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 LTBQ06643 244 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 ARHGAP11BQ3KRB8 267 aa10.83□□□□□ -0.68
LTBR-203ENST00000441074 C11orf87Q6NUJ2 197 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms