RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 ADGRG3Q86Y34 549 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 FADS6Q8N9I5 356 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 FAM83FQ8NEG4 500 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR10H4Q8NGA5 316 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR5J2Q8NH18 312 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR52N1Q8NH53 320 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 UFD1Q92890 307 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RASD2Q96D21 266 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ZHX1-C8orf76Q96EF9 292 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MRGPRX4Q96LA9 322 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 JAM3Q9BX67 310 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 HCAR1Q9BXC0 346 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 EXO5Q9H790 373 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ISYNA1Q9NPH2 558 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GRHPRQ9UBQ7 328 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SEC14L4Q9UDX3 406 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TINAGQ9UJW2 476 aa13.04□□□□□ -0.32
TNFRSF1A-204ENST00000440083 DIDO1Q9BTC0 2240 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 DAPL1A0PJW8 107 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ZC3H12DA2A288 527 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SHISA8B8ZZ34 492 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 NPIPA2E9PIF3 369 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 NPIPA3F8WFD2 350 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ZNF208O43345 1280 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 HPNP05981 417 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ABOP16442 354 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SLC2A5P22732 501 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SDHAP31040 664 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MAP2K6P52564 334 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LTBQ06643 244 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SGCBQ16585 318 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 DGUOKQ16854 277 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PLPPR5Q32ZL2 321 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SLC35D3Q5M8T2 416 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ARSKQ6UWY0 536 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 C3P1Q6ZMU1 363 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 USP43Q70EL4 1123 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LHFPL3Q86UP9 236 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ACBD7Q8N6N7 88 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LRRC75AQ8NAA5 344 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 POMGNT2Q8NAT1 580 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 NDNFQ8TB73 568 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RPL3LQ92901 407 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 KISS1RQ969F8 398 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 DNAJA3Q96EY1 480 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 Q96M85 177 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TEAD3Q99594 435 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CHCHD6Q9BRQ6 235 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PTDSS2Q9BVG9 487 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LDAHQ9H6V9 325 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 INIPQ9NRY2 104 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ERVK13-1Q9NX77 482 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 DKKL1Q9UK85 242 aa13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RPH3AQ9Y2J0 694 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TRGV8A0A0C4DH27 118 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 C12orf71A8MTZ7 269 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 C11orf98E9PRG8 122 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 RNF13O43567 381 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 AKAP8O43823 692 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 NPIPB7O75200 414 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CBR3O75828 277 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TXNDC12O95881 172 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 F13BP05160 661 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 GYPBP06028 91 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 LIMS3P0CW19 117 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 LIMS4P0CW20 117 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 RNF224P0DH78 156 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CLUP10909 449 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 DPP4P27487 766 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 GRPRP30550 384 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 PTGS2P35354 604 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 IDUAP35475 653 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 UGT2B10P36537 528 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 RBPJQ06330 500 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 PON3Q15166 354 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SLC25A53Q5H9E4 307 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZNF362Q5T0B9 420 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR2G6Q5TZ20 316 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 NCCRP1Q6ZVX7 275 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CD163Q86VB7 1156 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TMEM99Q8N816 258 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ATP6V1C2Q8NEY4 427 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR5M1Q8NGP8 315 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR14L1PQ8NHC6 308 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 NEIL3Q8TAT5 605 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 PTP4A1Q93096 173 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 C1GALT1C1Q96EU7 318 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MRPL48Q96GC5 212 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 NMNAT3Q96T66 252 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CNN2Q99439 309 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TBX5Q99593 518 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ALG8Q9BVK2 526 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR2B2Q9GZK3 357 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR11A1Q9GZK7 315 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR51E2Q9H255 320 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 DCSTAMPQ9H295 470 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms