RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CDCA3Q99618 268 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC22A13Q9Y226 551 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 PYCARD-AS1I3L0S3 204 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 SMAD9O15198 467 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 DRD1P21728 446 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 MEP1BQ16820 701 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 OR5M10Q6IEU7 315 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 TMEM184AQ6ZMB5 413 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 MDGA2Q7Z553 956 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 MARCH3Q86UD3 253 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 CMIPQ8IY22 773 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 PRSS35Q8N3Z0 413 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 OR2G2Q8NGZ5 317 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 HGDQ93099 445 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 CCDC74AQ96AQ1 378 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 ELMOD3Q96FG2 381 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC38A3Q99624 504 aa12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 C7orf50Q9BRJ6 194 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-204ENST00000439977 A0A1B0GVI7 797 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 M0R233 179 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 ASAH2BP0C7U1 165 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 CCKBRP32239 447 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 PSMD4P55036 377 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 PSMA6P60900 246 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 ZP2Q05996 745 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 COL28A1Q2UY09 1125 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 FAM69AQ5T7M9 428 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 SIGIRRQ6IA17 410 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 BAIAP2L2Q6UXY1 529 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 LRRTM1Q86UE6 522 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 COMMD7Q86VX2 200 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC38A6Q8IZM9 456 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 LRRC75AQ8NAA5 344 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 TSEN15Q8WW01 171 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 HAVCR1Q96D42 359 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 MRPL39Q9NYK5 338 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 EML5Q05BV3 1969 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 ANKRD20A5PA0PJZ0 165 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 POM121CA8CG34 1229 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 CHURC1-FNTBB4DL54 471 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 NSA2O95478 260 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 ABHD16AO95870 558 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 PDGFAP04085 211 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 HIST1H2ABP04908 130 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 FNTBP49356 437 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 MRPS21P82921 87 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 SHISA6Q6ZSJ9 500 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 HIST3H2AQ7L7L0 130 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 EXD3Q8N9H8 876 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 PLPP7Q8NBV4 271 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 LMX1AQ8TE12 382 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 KLHDC7BQ96G42 594 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 LRFN5Q96NI6 719 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 ZMAT3Q9HA38 289 aaKnown RBP12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 ASXL3Q9C0F0 2248 aa12.28□□□□□ -0.44
HERPUD1-204ENST00000439977 OR4C45A6NMZ5 311 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 SRPX2O60687 465 aaPredicted RBP12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 PROS1P07225 676 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 PNMTP11086 282 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 POU3F2P20265 443 aaPredicted RBP12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC37A1P57057 533 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 C2orf68Q2NKX9 166 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 SFRP5Q5T4F7 317 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 GPR139Q6DWJ6 353 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 FAM198BQ6UWH4 519 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 BIVMQ86UB2 503 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 CDC20BQ86Y33 519 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 MIB2Q96AX9 1013 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 OMA1Q96E52 524 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF224Q9NZL3 707 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 GMEB2Q9UKD1 530 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.44
HERPUD1-204ENST00000439977 ECDO95905 644 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 CXCL2P19875 107 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 RAG2P55895 527 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 AP3S2P59780 193 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF117Q03924 483 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 DEFB133Q30KQ1 61 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 VWA2Q5GFL6 755 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 WDR38Q5JTN6 314 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 METTL11BQ5VVY1 283 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 SLC6A19Q695T7 634 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 TMEM151BQ8IW70 566 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 SLC43A2Q8N370 569 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 OR5M1Q8NGP8 315 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 MED30Q96HR3 178 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 ELOVL3Q9HB03 270 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 AKAP7Q9P0M2 348 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 PIPOXQ9P0Z9 390 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 TRAV18A0A075B6X5 111 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 RPS10-NUDT3A0A1W2PQS6 291 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 C2orf72A6NCS6 295 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 ACOT7O00154 380 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 WNT11O96014 354 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 ALOX5APP20292 161 aa12.27□□□□□ -0.45
HERPUD1-204ENST00000439977 NR0B1P51843 470 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms