RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HOXB3P14651 431 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 M6PRP20645 277 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 MAOAP21397 527 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 IL32P24001 234 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 DCTDP32321 178 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 OR1D4P47884 311 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 EMP2P54851 167 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 HSD11B2P80365 405 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 CLLU1Q5K131 121 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 THSD4Q6ZMP0 1018 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 STX12Q86Y82 276 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 UEVLDQ8IX04 471 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 ZSCAN1Q8NBB4 408 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 PLPP7Q8NBV4 271 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 NAXEQ8NCW5 288 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 C17orf47Q8NEP4 570 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 OR6M1Q8NGM8 313 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 BAHD1Q8TBE0 780 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 NT5CQ8TCD5 201 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 PATE1Q8WXA2 126 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SLC46A1Q96NT5 459 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 CCNL2Q96S94 520 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 DEFB126Q9BYW3 111 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 CDCP1Q9H5V8 836 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 ZMAT3Q9HA38 289 aaKnown RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TAS2R5Q9NYW4 299 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TP53I11O14683 189 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM127O75204 238 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 CRTAPO75718 401 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SDHAP31040 664 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 RPL35P42766 123 aaKnown RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 RAB5BP61020 215 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 POU3F1Q03052 451 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 ACSM1Q08AH1 577 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TNK1Q13470 666 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 ZIC1Q15915 447 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TCTN1Q2MV58 587 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 FBXO46Q6PJ61 603 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 STAC2Q6ZMT1 411 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 NLRC3Q7RTR2 1065 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 FRMD1Q8N878 549 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 RCBTB1Q8NDN9 531 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 PXT1Q8NFP0 134 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 OR5T2Q8NGG2 359 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 STK35Q8TDR2 534 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 MIB2Q96AX9 1013 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TOE1Q96GM8 510 aaKnown RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 LCORQ96JN0 433 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SLC41A2Q96JW4 573 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 HIST1H2AAQ96QV6 131 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 LPAR4Q99677 370 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TPSD1Q9BZJ3 242 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SLC19A3Q9BZV2 496 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 C6orf106Q9H6K1 298 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 A0A0G2JMZ2 1700 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 LRRC37A2A6NM11 1700 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 MEIKINA0A087WXM9 373 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 KNG1P01042 644 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 WNT1P04628 370 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 GAAP10253 952 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF43P17038 809 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 ITGB8P26012 769 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 EMDP50402 254 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 CRYBA2P53672 197 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 HSD17B7P56937 341 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 MRPS21P82921 87 aaKnown RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 MLF2Q15773 248 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 ST3GAL2Q16842 350 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SPIN3Q5JUX0 258 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 COX15Q7KZN9 410 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 ABHD12BQ7Z5M8 362 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 TRAPPC6BQ86SZ2 158 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 CA13Q8N1Q1 262 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SNIP1Q8TAD8 396 aaKnown RBP6.12□□□□□ -1.43
CSDE1-205ENST00000438362 CD300LFQ8TDQ1 290 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 PAQR8Q8TEZ7 354 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 SIGLEC11Q96RL6 698 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 MAP3K3Q99759 626 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 RGCCQ9H4X1 137 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 MAN2C1Q9NTJ4 1040 aa6.12□□□□□ -1.43
CSDE1-205ENST00000438362 A0A0B4J2E0 115 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 A0A1B0GX12 115 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 OR5K3A6NET4 321 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 C9J4A7 227 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 SUSD5O60279 629 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 NTN1O95631 604 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF28P17035 718 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 HOXB9P17482 250 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF616Q08AN1 781 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 AANATQ16613 207 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 CLPPQ16740 277 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 LINC00303Q3SY05 128 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 OR5M10Q6IEU7 315 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 MRM1Q6IN84 353 aaKnown RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 Q6ZTK2 550 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 TSEN54Q7Z6J9 526 aaKnown RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 SVBPQ8N300 66 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 OR13C9Q8NGT0 318 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 OR14A16Q8NHC5 309 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 YIPF5Q969M3 257 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms