RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 TREM2Q9NZC2 230 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ZIM2Q9NZV7 527 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 MYEF2Q9P2K5 600 aaKnown RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 POFUT2Q9Y2G5 429 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 SPEF1Q9Y4P9 236 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ANK2Q01484 3957 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 A0A087WUJ7 227 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 C5orf58C9J3I9 102 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 H0YHG0 523 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 AKAP8O43823 692 aaKnown RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 RGS9O75916 674 aaPredicted RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 PATE4P0C8F1 98 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 SAGP10523 405 aaPredicted RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 NAT2P11245 290 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 B4GALT1P15291 398 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 HOXB9P17482 250 aaPredicted RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 PRKAR1BP31321 381 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 GLRXP35754 106 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 GPR6P46095 362 aaPredicted RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 GIPRP48546 466 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 PTDSS1P48651 473 aaKnown RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 RAB1AP62820 205 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 POU3F1Q03052 451 aaPredicted RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 PMS2P3Q13401 168 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 CAMK2DQ13557 499 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 RAB39AQ14964 217 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 MFSD13AQ14CX5 517 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 TRMT5Q32P41 509 aaKnown RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ALKBH6Q3KRA9 238 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ALG10BQ5I7T1 473 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 FAM69AQ5T7M9 428 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 GKAP1Q5VSY0 366 aaPredicted RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ULK3Q6PHR2 472 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 C5orf46Q6UWT4 87 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ZNF627Q7L945 461 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 SKA3Q8IX90 412 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 C10orf111Q8N326 155 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ADPRHL1Q8NDY3 354 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 SEMA6DQ8NFY4 1073 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 OR6N1Q8NGY5 312 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 NFKBIDQ8NI38 313 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 FGFBP3Q8TAT2 258 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 MGARPQ8TDB4 240 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 DNAJA4Q8WW22 397 aaPredicted RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 GTF2H4Q92759 462 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 RDH5Q92781 318 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 TMEM186Q96B77 213 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 MAELQ96JY0 434 aaKnown RBP3.79□□□□□ -1.8
LINC01239-202ENST00000436786 MOGAT1Q96PD6 335 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 LRRC37BQ96QE4 947 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 WFDC6Q9BQY6 131 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ASPNQ9BXN1 380 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 PARD6BQ9BYG5 372 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 MS4A5Q9H3V2 200 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 B3GAT2Q9NPZ5 323 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 HIF1ANQ9NWT6 349 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 SLC25A37Q9NYZ2 338 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ZNF224Q9NZL3 707 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 NOX1Q9Y5S8 564 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 PLCE1Q9P212 2302 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 ARFGEF3Q5TH69 2177 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 MALRD1Q5VYJ5 2156 aa3.79□□□□□ -1.8
LINC01239-202ENST00000436786 TMEM120BA0PK00 339 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 ZNF726A6NNF4 738 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 LRRN3E7EW58 273 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 SLCO1B7G3V0H7 640 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 PLPP3O14495 311 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 UBDO15205 165 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 PPIHO43447 177 aaKnown RBP3.78□□□□□ -1.8
LINC01239-202ENST00000436786 TPST2O60704 377 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 NCR1O76036 304 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 RAB36O95755 333 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 MSMBP08118 114 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 GAAP10253 952 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 ETS2P15036 469 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 PCMT1P22061 227 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 ACHEP22303 614 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 AHCYP23526 432 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 CDH12P55289 794 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 TMEM33P57088 247 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 LMO4P61968 165 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 GALK2Q01415 458 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 OR1Q1Q15612 314 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 C11orf91Q3C1V1 193 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 FAM91A1Q658Y4 838 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 REEP3Q6NUK4 255 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 DHRS4L2Q6PKH6 230 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 DEF8Q6ZN54 512 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 ZNF584Q8IVC4 421 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 MSRB3Q8IXL7 192 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 MIER2Q8N344 545 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 C10orf53Q8N6V4 93 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 SCAIQ8N9R8 606 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 OR6S1Q8NH40 331 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 ZFAND2BQ8WV99 257 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 SLC47A1Q96FL8 570 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 MEGF10Q96KG7 1140 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 LRR1Q96L50 414 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 ULBP2Q9BZM5 246 aa3.78□□□□□ -1.8
LINC01239-202ENST00000436786 RAD21L1Q9H4I0 556 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms