RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OR1D5P58170 312 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 GAB1Q13480 694 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 NPY5RQ15761 445 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 LRRC10Q5BKY1 277 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 MORN1Q5T089 497 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 FOXN4Q96NZ1 517 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 SLC46A2Q9BY10 475 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 OR51J1Q9H342 316 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 HRH4Q9H3N8 390 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 KLK10O43240 276 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 BMP1P13497 986 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 HTR2CP28335 458 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 LAP3P28838 519 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 APOBEC1P41238 236 aaKnown RBP10.35□□□□□ -0.75
SCN4A-201ENST00000435607 HLCSP50747 726 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 C6orf89Q6UWU4 347 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 PPT2Q9UMR5 302 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 SLC5A6Q9Y289 635 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 YTHDF2Q9Y5A9 579 aaKnown RBP10.35□□□□□ -0.75
SCN4A-201ENST00000435607 SNRNP70P08621 437 aaKnown RBP10.35□□□□□ -0.75
SCN4A-201ENST00000435607 TNFRSF1BP20333 461 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 ADPRMQ3LIE5 342 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 PAAF1Q9BRP4 392 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 NFS1Q9Y697 457 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 HPNP05981 417 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 OR2T7P0C7T2 308 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 OR10A3P58181 314 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 CYS1Q717R9 158 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF573Q86YE8 665 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 MAFAQ8NHW3 353 aaPredicted RBP10.35□□□□□ -0.75
SCN4A-201ENST00000435607 FAM213BQ8TBF2 198 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 SEMA4CQ9C0C4 833 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 MED17Q9NVC6 651 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 OIP5O43482 229 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 NSA2O95478 260 aaKnown RBP10.35□□□□□ -0.75
SCN4A-201ENST00000435607 GLRA1P23415 457 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 SLC6A11P48066 632 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 CLN3Q13286 438 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 RBMS2Q15434 407 aaKnown RBP10.35□□□□□ -0.75
SCN4A-201ENST00000435607 NKAIN1Q4KMZ8 207 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 WDR88Q6ZMY6 472 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 SEMA6DQ8NFY4 1073 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 OR5B3Q8NH48 314 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 SLCO5A1Q9H2Y9 848 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 OR6C76A6NM76 312 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 HPGDSO60760 199 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 OR6V1Q8N148 313 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 OR2M7Q8NG81 312 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 CHAC2Q8WUX2 184 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 NIPSNAP3BQ9BS92 247 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 NTMT1Q9BV86 223 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 BABAM2Q9NXR7 383 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 CD300AQ9UGN4 299 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 CEPT1Q9Y6K0 416 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 K7EQS6 105 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 PRKACAP17612 351 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 ACKR3P25106 362 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF93P35789 620 aaPredicted RBP10.35□□□□□ -0.75
SCN4A-201ENST00000435607 TM4SF4P48230 202 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 SOX4Q06945 474 aaPredicted RBP10.35□□□□□ -0.75
SCN4A-201ENST00000435607 NETO1Q8TDF5 533 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 ATP5SQ99766 215 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 C20orf85Q9H1P6 137 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 GYPBP06028 91 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 PM20D1Q6GTS8 502 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 TFAP2EQ6VUC0 442 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 LACC1Q8IV20 430 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 OR8J2Q8NGG1 315 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 DEDD2Q8WXF8 326 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 IL17CQ9P0M4 197 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM82A0PJX8 343 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 MEIOCA2RUB1 952 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 HS3ST1O14792 307 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 C15orf39Q6ZRI6 1047 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 LSRQ86X29 649 aaPredicted RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 TUBB1Q9H4B7 451 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 ANKRD10Q9NXR5 420 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 OSGIN2Q9Y236 505 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 PTGDR2Q9Y5Y4 395 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 DNASE2O00115 360 aaPredicted RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 FRS3O43559 492 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 CSF3P09919 207 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 GM2AP17900 193 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 EN2P19622 333 aaPredicted RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 SH3BP2P78314 561 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 ADAMTSL4Q6UY14 1074 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 MED25Q71SY5 747 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 LRRC56Q8IYG6 542 aaPredicted RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 GABRG1Q8N1C3 465 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 ASB11Q8WXH4 323 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 UBE2ZQ9H832 354 aaPredicted RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 J3QR89 54 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 AIFM1O95831 613 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 NAGAP17050 411 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 ARSDP51689 593 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 GLYR1Q49A26 553 aaPredicted RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 MEX3DQ86XN8 651 aaKnown RBP10.34□□□□□ -0.75
SCN4A-201ENST00000435607 GGHQ92820 318 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 GRAMD2BQ96HH9 432 aa10.34□□□□□ -0.75
SCN4A-201ENST00000435607 XYLT2Q9H1B5 865 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms