RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 ZNF43P17038 809 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 GPR85P60893 370 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 OR5H6Q8NGV6 325 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 ADIPOR1Q96A54 375 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 SMIM19Q96E16 107 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 RNF32Q9H0A6 362 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 CDCP1Q9H5V8 836 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 ICAM5Q9UMF0 924 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 DHDHQ9UQ10 334 aa11.02□□□□□ -0.65
CLDN4-203ENST00000435050 NPIPB9F8W1W9 429 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 KRT33AO76009 404 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 MPZL1O95297 269 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 TCN2P20062 427 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 RPS18P62269 152 aaKnown RBP11.01□□□□□ -0.65
CLDN4-203ENST00000435050 LTBQ06643 244 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 SLC16A9Q7RTY1 509 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 OVCH1Q7RTY7 1134 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 MRGPREQ86SM8 312 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 UEVLDQ8IX04 471 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 FITM1A5D6W6 292 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 NOTOA8MTQ0 251 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 ARPC3O15145 178 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 NAT2P11245 290 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 RCVRNP35243 200 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 MESTQ5EB52 335 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 PRSS42Q7Z5A4 293 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 IQCF2Q8IXL9 164 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 S100A16Q96FQ6 103 aaKnown RBP11.01□□□□□ -0.65
CLDN4-203ENST00000435050 GPER1Q99527 375 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 TMEM43Q9BTV4 400 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 KLHL13Q9P2N7 655 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 SF3B6Q9Y3B4 125 aaKnown RBP11.01□□□□□ -0.65
CLDN4-203ENST00000435050 IGKV3-11P04433 115 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 IL11P20809 199 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 MAPK3P27361 379 aaPredicted RBP11.01□□□□□ -0.65
CLDN4-203ENST00000435050 EVX1P49640 407 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 ALKBH1Q13686 389 aaKnown RBP11.01□□□□□ -0.65
CLDN4-203ENST00000435050 ZNF79Q15937 498 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 BCL2L15Q5TBC7 163 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 YOD1Q5VVQ6 348 aaPredicted RBP11.01□□□□□ -0.65
CLDN4-203ENST00000435050 LRRC28Q86X40 367 aaPredicted RBP11.01□□□□□ -0.65
CLDN4-203ENST00000435050 NAXEQ8NCW5 288 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 OR4D9Q8NGE8 314 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 GPR148Q8TDV2 347 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 SAP25Q8TEE9 199 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 KISS1RQ969F8 398 aaPredicted RBP11.01□□□□□ -0.65
CLDN4-203ENST00000435050 MED28Q9H204 178 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 RNF121Q9H920 327 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 CLDN16Q9Y5I7 305 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 V9GY05 133 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 V9GYH0 126 aa11.01□□□□□ -0.65
CLDN4-203ENST00000435050 ZFPL1O95159 310 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 HLA-DOBP13765 273 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 SRMP19623 302 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 CASP3P42574 277 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 PITPNAQ00169 270 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 ZNF362Q5T0B9 420 aaPredicted RBP11□□□□□ -0.65
CLDN4-203ENST00000435050 OR8S1Q8NH09 359 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 WDR77Q9BQA1 342 aaPredicted RBP11□□□□□ -0.65
CLDN4-203ENST00000435050 PPIL3Q9H2H8 161 aaKnown RBP11□□□□□ -0.65
CLDN4-203ENST00000435050 NEK6Q9HC98 313 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 NUDT15Q9NV35 164 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 SLCO1C1Q9NYB5 712 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 MOKQ9UQ07 419 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 HIF3AQ9Y2N7 669 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 SMAD9O15198 467 aaKnown RBP11□□□□□ -0.65
CLDN4-203ENST00000435050 TLX3O43711 291 aaPredicted RBP11□□□□□ -0.65
CLDN4-203ENST00000435050 UCHL1P09936 223 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 CFL1P23528 166 aaKnown RBP11□□□□□ -0.65
CLDN4-203ENST00000435050 GAS1P54826 345 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 DMRTC1Q5HYR2 192 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 SLC35D3Q5M8T2 416 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 AGAP6Q5VW22 663 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 ZBTB8BQ8NAP8 495 aaPredicted RBP11□□□□□ -0.65
CLDN4-203ENST00000435050 BEST4Q8NFU0 473 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 AGAP4Q96P64 663 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 RAB33BQ9H082 229 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 EXO5Q9H790 373 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 EMC9Q9Y3B6 208 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 SLC2A1P11166 492 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 PTHLHP12272 177 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 CRABP1P29762 137 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 ARPC4P59998 168 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 EFNB1P98172 346 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 SNTB2Q13425 540 aaKnown RBP11□□□□□ -0.65
CLDN4-203ENST00000435050 TMEM164Q5U3C3 297 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 NDUFAF7Q7L592 441 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 MDGA2Q7Z553 956 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 ZNF227Q86WZ6 799 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 CHIAQ9BZP6 476 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 SVILO95425 2214 aa11□□□□□ -0.65
CLDN4-203ENST00000435050 PRSS37A4D1T9 235 aa10.99□□□□□ -0.65
CLDN4-203ENST00000435050 OR6C76A6NM76 312 aa10.99□□□□□ -0.65
CLDN4-203ENST00000435050 PLPP2O43688 288 aa10.99□□□□□ -0.65
CLDN4-203ENST00000435050 ETV6P41212 452 aa10.99□□□□□ -0.65
CLDN4-203ENST00000435050 EGR4Q05215 589 aa10.99□□□□□ -0.65
CLDN4-203ENST00000435050 SPOCK1Q08629 439 aa10.99□□□□□ -0.65
CLDN4-203ENST00000435050 SGCBQ16585 318 aa10.99□□□□□ -0.65
CLDN4-203ENST00000435050 RNLSQ5VYX0 342 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms