RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 GK2Q14410 553 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 MICBQ29980 383 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PDSS1Q5T2R2 415 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF660Q6AZW8 331 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RBPMS2Q6ZRY4 209 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 Q6ZVL8 140 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TMUB2Q71RG4 321 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 LILRA3Q8N6C8 439 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TMEM99Q8N816 258 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 DNAAF1Q8NEP3 725 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 C17orf47Q8NEP4 570 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 AKR7LQ8NHP1 331 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RAB40AQ8WXH6 277 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TMEM186Q96B77 213 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SMIM19Q96E16 107 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ZDHHC12Q96GR4 267 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 LRIG1Q96JA1 1093 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF514Q96K75 400 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 FCRL4Q96PJ5 515 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 NEU1Q99519 415 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 MNTQ99583 582 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SLC38A3Q99624 504 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PIMREGQ9BSJ6 248 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 C1QTNF6Q9BXI9 259 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GSDMCQ9BYG8 508 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 CDCP1Q9H5V8 836 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GAREM1Q9H706 876 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 UCK1Q9HA47 277 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 BARX1Q9HBU1 254 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PRMT8Q9NR22 394 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 CA10Q9NS85 328 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ZCCHC3Q9NUD5 404 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TEX10Q9NXF1 929 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 NTMQ9P121 344 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF223Q9UK11 482 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 FBXO4Q9UKT5 387 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GAB2Q9UQC2 676 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 YIPF1Q9Y548 306 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 NUP210Q8TEM1 1887 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PRSS38A1L453 326 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 MAN2B1O00754 1011 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 KRT33AO76009 404 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TOXO94900 526 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 MT-ATP6P00846 226 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 CALCBP10092 127 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GJA1P17302 382 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ADH6P28332 368 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 HOXA6P31267 233 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TRHRP34981 398 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RORAP35398 523 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 LGALS4P56470 323 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TAS2R38P59533 333 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RPS11P62280 158 aaKnown RBP eCLIP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF85Q03923 595 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GGTLC2Q14390 218 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TMEM255AQ5JRV8 349 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 CLEC12AQ5QGZ9 265 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 FAM27D1Q5T7N8 215 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PIP5KL1Q5T9C9 394 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GSG1LQ6UXU4 331 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 MOB3CQ70IA8 216 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 KCTD9Q7L273 389 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SLC36A1Q7Z2H8 476 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GDF7Q7Z4P5 450 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 UBE3DQ7Z6J8 389 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF740Q8NDX6 193 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 OR4D9Q8NGE8 314 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 OR5D16Q8NGK9 328 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 OR6S1Q8NH40 331 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SMAP2Q8WU79 429 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PCNPQ8WW12 178 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PHYHIPLQ96FC7 376 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SLC41A3Q96GZ6 507 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 C16orf92Q96LL3 132 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TEAD3Q99594 435 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 AIF1LQ9BQI0 150 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RIOK2Q9BVS4 552 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SLC19A3Q9BZV2 496 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RAB33BQ9H082 229 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PCBD2Q9H0N5 130 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 OR52D1Q9H346 318 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 EVA1AQ9H8M9 152 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ADGRL4Q9HBW9 690 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 NOX3Q9HBY0 568 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 KLHL28Q9NXS3 571 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RASL12Q9NYN1 266 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 LRIT1Q9P2V4 623 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SLC25A10Q9UBX3 287 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 CD84Q9UIB8 345 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GPR160Q9UJ42 338 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 LSM7Q9UK45 103 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 CLEC4EQ9ULY5 219 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RCE1Q9Y256 329 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SLC35A3Q9Y2D2 325 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 STRAPQ9Y3F4 350 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 HELZP42694 1942 aaKnown RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 FAM230AA0A1W2PPH8 454 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF716A6NP11 495 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ACOT7O00154 380 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 CDC42EP2O14613 210 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms