RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 UBE2NP61088 152 aaKnown RBP13.3□□□□□ -0.28
PTCD1-204ENST00000430982 SPIBQ01892 262 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 PRKCDQ05655 676 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 ACKR1Q16570 336 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 TBRG1Q3YBR2 411 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 PODNL1Q6PEZ8 512 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 KLHL17Q6TDP4 642 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 RNF113BQ8IZP6 322 aaKnown RBP13.3□□□□□ -0.28
PTCD1-204ENST00000430982 OR52J3Q8NH60 311 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 OR6X1Q8NH79 312 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 LIPHQ8WWY8 451 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 BCL2L2Q92843 193 aaPredicted RBP13.3□□□□□ -0.28
PTCD1-204ENST00000430982 CCDC124Q96CT7 223 aaKnown RBP13.3□□□□□ -0.28
PTCD1-204ENST00000430982 ZNF837Q96EG3 531 aaPredicted RBP13.3□□□□□ -0.28
PTCD1-204ENST00000430982 CLPTM1LQ96KA5 538 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 ADAD1Q96M93 576 aaKnown RBP13.3□□□□□ -0.28
PTCD1-204ENST00000430982 THTPAQ9BU02 230 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 ULBP2Q9BZM5 246 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 C1orf21Q9H246 121 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 MUC13Q9H3R2 512 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 ANKRD19PQ9H560 264 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 POFUT2Q9Y2G5 429 aa13.3□□□□□ -0.28
PTCD1-204ENST00000430982 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
PTCD1-204ENST00000430982 TRBV4-1A0A0J9YWV2 114 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 A0A1W2PRQ8 180 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 TRIM64A6NGJ6 449 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 TRIM64BA6NI03 449 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 SMPD2O60906 423 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 SEC14L2O76054 403 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 GPR4P46093 362 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 TUBA1BP68363 451 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 TUBA4AP68366 448 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 DGCR6Q14129 220 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 LAPTM4AQ15012 233 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 ADAM5Q6NVV9 412 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 ANKRD16Q6P6B7 361 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 TUBA1AQ71U36 451 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 YTHDF3Q7Z739 585 aaKnown RBP13.29□□□□□ -0.28
PTCD1-204ENST00000430982 DHFR2Q86XF0 187 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 PHC2Q8IXK0 858 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 OR13C2Q8NGS9 318 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 OR51A7Q8NH64 312 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 SLC7A13Q8TCU3 470 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 AKAP1Q92667 903 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTCD1-204ENST00000430982 PIGTQ969N2 578 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 ZNF566Q969W8 418 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 LRR1Q96L50 414 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 SEPHS2Q99611 448 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 TMEM204Q9BSN7 226 aa13.29□□□□□ -0.28
PTCD1-204ENST00000430982 MAGED1Q9Y5V3 778 aaPredicted RBP13.29□□□□□ -0.28
PTCD1-204ENST00000430982 RAI1Q7Z5J4 1906 aaPredicted RBP13.29□□□□□ -0.28
PTCD1-204ENST00000430982 TRAV27A0A087WT01 109 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 ABCD4O14678 606 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 SMAD7O15105 426 aaKnown RBP13.28□□□□□ -0.28
PTCD1-204ENST00000430982 GYG2O15488 501 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 STAMBPO95630 424 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 DAP3P51398 398 aaKnown RBP13.28□□□□□ -0.28
PTCD1-204ENST00000430982 SMIM11AP58511 58 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 MS4A2Q01362 244 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 KRTAP1-1Q07627 177 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 TOP3AQ13472 1001 aaPredicted RBP13.28□□□□□ -0.28
PTCD1-204ENST00000430982 TRIM25Q14258 630 aaKnown RBP13.28□□□□□ -0.28
PTCD1-204ENST00000430982 IQCCQ4KMZ1 466 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 DNAL1Q4LDG9 190 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 ALG10Q5BKT4 473 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 MTX3Q5HYI7 312 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 TMEM108Q6UXF1 575 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 C20orf204Q6ZNR8 217 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 OAFQ86UD1 273 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 IGFN1Q86VF2 1251 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 ZDHHC21Q8IVQ6 265 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
PTCD1-204ENST00000430982 KBTBD8Q8NFY9 601 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 ASB10Q8WXI3 467 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 TMEM54Q969K7 222 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 SLC25A44Q96H78 314 aaPredicted RBP13.28□□□□□ -0.28
PTCD1-204ENST00000430982 FAM46AQ96IP4 442 aaKnown RBP13.28□□□□□ -0.28
PTCD1-204ENST00000430982 TNFRSF13CQ96RJ3 184 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 NELFAQ9H3P2 528 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 OBP2BQ9NPH6 170 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 GLTPQ9NZD2 209 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 TMEM5Q9Y2B1 443 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 HIF3AQ9Y2N7 669 aa13.28□□□□□ -0.28
PTCD1-204ENST00000430982 ZNF99A8MXY4 864 aaPredicted RBP13.27□□□□□ -0.29
PTCD1-204ENST00000430982 HS3ST1O14792 307 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 GADD45GO95257 159 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 IGHG1P01857 330 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 PTAFRP25105 342 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 CD40P25942 277 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 CAPZA2P47755 286 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 SLC9A3P48764 834 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 CLRN1P58418 232 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 SEC23BQ15437 767 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 LCN8Q6JVE9 175 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 HDDC2Q7Z4H3 204 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.29
PTCD1-204ENST00000430982 MAGEE2Q8TD90 523 aaPredicted RBP13.27□□□□□ -0.29
PTCD1-204ENST00000430982 NEUROG1Q92886 237 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms