RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 EPYCQ99645 322 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 KCNS3Q9BQ31 491 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 CHODLQ9H9P2 273 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 FGFR1OP2Q9NVK5 253 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 FZR1Q9UM11 496 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 FKBP7Q9Y680 259 aa10.15□□□□□ -0.78
HDAC4-202ENST00000430200 IGKV1D-43A0A0B4J1Z2 117 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 SH3PXD2BA1X283 911 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 TRAPPC13A5PLN9 417 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 PHF1O43189 567 aaPredicted RBP10.14□□□□□ -0.79
HDAC4-202ENST00000430200 AKAP8O43823 692 aaKnown RBP10.14□□□□□ -0.79
HDAC4-202ENST00000430200 LILRA1O75019 489 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 MT-ATP6P00846 226 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 C8BP07358 591 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 FAM157CP0CG43 387 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 HOXB1P14653 301 aaPredicted RBP10.14□□□□□ -0.79
HDAC4-202ENST00000430200 NR4A1P22736 598 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 ARR3P36575 388 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 PTDSS1P48651 473 aaKnown RBP10.14□□□□□ -0.79
HDAC4-202ENST00000430200 CSNK1A1P48729 337 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 ERVS71-1P61550 626 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 KLF10Q13118 480 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 DAG1Q14118 895 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 RAB39AQ14964 217 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 FXNQ16595 210 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 CHRFAM7AQ494W8 412 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 HDXQ7Z353 690 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 SNX32Q86XE0 403 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 MEX3DQ86XN8 651 aaKnown RBP10.14□□□□□ -0.79
HDAC4-202ENST00000430200 BHLHE22Q8NFJ8 381 aaPredicted RBP10.14□□□□□ -0.79
HDAC4-202ENST00000430200 OR4F15Q8NGB8 312 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 OR6N1Q8NGY5 312 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 MOSPD2Q8NHP6 518 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 LRR1Q96L50 414 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 TSPAN32Q96QS1 320 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 SH3GL3Q99963 347 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 SYT3Q9BQG1 590 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 PIMREGQ9BSJ6 248 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 RABEP2Q9H5N1 569 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 SAR1AQ9NR31 198 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 SLC13A4Q9UKG4 626 aa10.14□□□□□ -0.79
HDAC4-202ENST00000430200 ARHGAP32A7KAX9 2087 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 LOC390937A0A1W2PQ73 354 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 MRASO14807 208 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 WNT9BO14905 357 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 STAMBPO95630 424 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 F13BP05160 661 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 ADRA2AP08913 450 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 CCL2P13500 99 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 DAOP14920 347 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF23P17027 643 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 ALDH3B1P43353 468 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 OR1E2P47887 323 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 SEC24CP53992 1094 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 MYBPC1Q00872 1141 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 FMODQ06828 376 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 RPL18Q07020 188 aaKnown RBP10.13□□□□□ -0.79
HDAC4-202ENST00000430200 ZP4Q12836 540 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 KRTAP24-1Q3LI83 254 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 ELFN2Q5R3F8 820 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 PATL1Q86TB9 770 aaKnown RBP10.13□□□□□ -0.79
HDAC4-202ENST00000430200 CLDN22Q8N7P3 220 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 NOXO1Q8NFA2 376 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 OR6X1Q8NH79 312 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 TSPEARQ8WU66 669 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 GTF3AQ92664 365 aaKnown RBP10.13□□□□□ -0.79
HDAC4-202ENST00000430200 MRPL24Q96A35 216 aaKnown RBP10.13□□□□□ -0.79
HDAC4-202ENST00000430200 LRRC58Q96CX6 371 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 NMD3Q96D46 503 aaKnown RBP10.13□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF583Q96ND8 569 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF347Q96SE7 839 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 KCNK17Q96T54 332 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 SEPHS2Q99611 448 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 TMEM38BQ9NVV0 291 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 GLTPQ9NZD2 209 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 SELENONQ9NZV5 590 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 ZNF229Q9UJW7 825 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 SH3GLB1Q9Y371 365 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 UGT2A1Q9Y4X1 527 aa10.13□□□□□ -0.79
HDAC4-202ENST00000430200 RNF212BA8MTL3 300 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 NDUFS8O00217 210 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 RNF13O43567 381 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 SLC2A10O95528 541 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 HPXP02790 462 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 TSPAN19P0C672 248 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 APEHP13798 732 aaKnown RBP10.12□□□□□ -0.79
HDAC4-202ENST00000430200 TCN1P20061 433 aaPredicted RBP10.12□□□□□ -0.79
HDAC4-202ENST00000430200 GIFP27352 417 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 RAB1AP62820 205 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 PIN1Q13526 163 aaPredicted RBP10.12□□□□□ -0.79
HDAC4-202ENST00000430200 RIN1Q13671 783 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 HIST3H3Q16695 136 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 CYB5R2Q6BCY4 276 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 DEF8Q6ZN54 512 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 NANOGNBQ7Z5D8 188 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 SLC22A24Q8N4F4 322 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 POU5F2Q8N7G0 328 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 OR8J3Q8NGG0 315 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 ASB10Q8WXI3 467 aa10.12□□□□□ -0.79
HDAC4-202ENST00000430200 YIPF5Q969M3 257 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms