RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 GSTT2P0CG29 244 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 GSTT2BP0CG30 244 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 EPHA8P29322 1005 aaPredicted RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 ERP29P30040 261 aaKnown RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 HOXD12P35452 270 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 SF3B4Q15427 424 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■■■■□ 19.9
THBS3-202ENST00000428962 ACKR1Q16570 336 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 SLC36A2Q495M3 483 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 SLC22A10Q63ZE4 541 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 ANKRD37Q7Z713 158 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 ADGRG3Q86Y34 549 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 UBALD2Q8IYN6 164 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 EID2Q8N6I1 236 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 ZNF433Q8N7K0 673 aaPredicted RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 OTOSQ8NHW6 89 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 NUBPLQ8TB37 319 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 C15orf40Q8WUR7 153 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 SMIM4Q8WVI0 70 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 ST8SIA1Q92185 356 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 RNF170Q96K19 258 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 FYTTD1Q96QD9 318 aaKnown RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 TSPAN10Q9H1Z9 355 aaPredicted RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 NIPAL2Q9H841 368 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 VSX1Q9NZR4 365 aaPredicted RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 FRRS1LQ9P0K9 344 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 MRPS7Q9Y2R9 242 aaKnown RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 ETV7Q9Y603 341 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 EML5Q05BV3 1969 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 ANKUB1A6NFN9 424 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 HLA-DQA2P01906 255 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 RAB40ALP0C0E4 278 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 BTCP35070 178 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 AGFG1P52594 562 aaKnown RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 SCAND1P57086 179 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 DGCR2P98153 550 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 DYRK1AQ13627 763 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 MFSD13AQ14CX5 517 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 COL28A1Q2UY09 1125 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 NKAIN1Q4KMZ8 207 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 HES5Q5TA89 166 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 C1QL3Q5VWW1 255 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 SHISA6Q6ZSJ9 500 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 DPY19L4Q7Z388 723 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 LIX1LQ8IVB5 337 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 ZNF676Q8N7Q3 588 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 OR2G2Q8NGZ5 317 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 ZNF417Q8TAU3 575 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 GPR148Q8TDV2 347 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 DUSP19Q8WTR2 217 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 RAB40AQ8WXH6 277 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 HSD17B8Q92506 261 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 GFM1Q96RP9 751 aaKnown RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 GFI1Q99684 422 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 SLC22A11Q9NSA0 550 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 MRPL39Q9NYK5 338 aaKnown RBP12.37□□□□□ -0.43
THBS3-202ENST00000428962 B9D1Q9UPM9 204 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 OR4C45A6NMZ5 311 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 M0R296 226 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 PLPP3O14495 311 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 SULT1B1O43704 296 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 ALOX12BO75342 701 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 CD3GP09693 182 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 DPP4P27487 766 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 AP3S2P59780 193 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 MRPS10P82664 201 aaKnown RBP12.36□□□□□ -0.43
THBS3-202ENST00000428962 C17orf67Q0P5P2 114 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 MAB21L1Q13394 359 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 SLC18B1Q6NT16 456 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 FDX2Q6P4F2 183 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 STAC2Q6ZMT1 411 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 CDH24Q86UP0 819 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 SIAH3Q8IW03 269 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 CMTM4Q8IZR5 234 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 ASCC1Q8N9N2 400 aaKnown RBP12.36□□□□□ -0.43
THBS3-202ENST00000428962 ZNF248Q8NDW4 579 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 OR8B4Q96RC9 309 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 OR6C1Q96RD1 312 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 BEX2Q9BXY8 128 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 PLEKHA1Q9HB21 404 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 ZNF275Q9NSD4 429 aaPredicted RBP12.36□□□□□ -0.43
THBS3-202ENST00000428962 RARRES3Q9UL19 164 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 PPIEQ9UNP9 301 aaKnown RBP12.36□□□□□ -0.43
THBS3-202ENST00000428962 SIT1Q9Y3P8 196 aa12.36□□□□□ -0.43
THBS3-202ENST00000428962 A6NIZ1 184 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 C17orf51A8MQB3 221 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 CENPBD1B2RD01 187 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 AGRPO00253 132 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 SCRG1O75711 98 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 TPPPO94811 219 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 ECDO95905 644 aaPredicted RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 PLGP00747 810 aaPredicted RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 C1QBP02746 253 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 DCNP07585 359 aaKnown RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 NAGAP17050 411 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 CRABP1P29762 137 aa12.35□□□□□ -0.43
THBS3-202ENST00000428962 DHPSP49366 369 aaPredicted RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 SRP9P49458 86 aaKnown RBP12.35□□□□□ -0.43
THBS3-202ENST00000428962 RAP1BP61224 184 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms