RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 VWA1Q6PCB0 445 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 BTLAQ7Z6A9 289 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 OR4Q3Q8NH05 313 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 SLC38A2Q96QD8 506 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 RBP7Q96R05 134 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 SNX18Q96RF0 628 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 KCNK17Q96T54 332 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 ALG12Q9BV10 488 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 LINC00470Q9BZP3 86 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 SLCO5A1Q9H2Y9 848 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 C12orf49Q9H741 205 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 BATF3Q9NR55 127 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 CMC2Q9NRP2 79 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 FAM118AQ9NWS6 357 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 KLHL21Q9UJP4 597 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 PROCRQ9UNN8 238 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 ARHGAP21Q5T5U3 1957 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 SLC16A6O15403 523 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 TRMUO75648 421 aaKnown RBP13.64□□□□□ -0.23
COL11A1-204ENST00000427239 IFNGP01579 166 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 PGA3P0DJD8 388 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 HIST1H1CP16403 213 aaKnown RBP13.64□□□□□ -0.23
COL11A1-204ENST00000427239 BMP5P22003 454 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 CLRN1P58418 232 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 KRR1Q13601 381 aaKnown RBP13.64□□□□□ -0.23
COL11A1-204ENST00000427239 HIST3H3Q16695 136 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 MESTQ5EB52 335 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 ZNF362Q5T0B9 420 aaPredicted RBP13.64□□□□□ -0.23
COL11A1-204ENST00000427239 THEM4Q5T1C6 240 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 SLC35F1Q5T1Q4 408 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 SLX4IPQ5VYV7 408 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 TTC23Q5W5X9 447 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 FBXW9Q5XUX1 488 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 NCCRP1Q6ZVX7 275 aaPredicted RBP13.64□□□□□ -0.23
COL11A1-204ENST00000427239 JAZF1Q86VZ6 243 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 CCDC71Q8IV32 467 aaPredicted RBP13.64□□□□□ -0.23
COL11A1-204ENST00000427239 C20orf196Q8IYI0 205 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 IQCF1Q8N6M8 205 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 ZNF555Q8NEP9 628 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 OR6N1Q8NGY5 312 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 RASD2Q96D21 266 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
COL11A1-204ENST00000427239 FLNCQ14315 2725 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 LOC100130705A0A1B0GUX0 176 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 PRSS37A4D1T9 235 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 RIIAD1A6NNX1 92 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 E9PQ18 207 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 MSTNO14793 375 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 KRT33AO76009 404 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 AGAP20933 346 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 CSNK1A1P48729 337 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 CDC42P60953 191 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 ADORA2A-AS1P86434 159 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 RUNX1T1Q06455 604 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 ITGADQ13349 1161 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 TFAP2EQ6VUC0 442 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 ABHD12BQ7Z5M8 362 aaPredicted RBP13.63□□□□□ -0.23
COL11A1-204ENST00000427239 GPR137CQ8N3F9 429 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 DHRSXQ8N5I4 330 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 OR52E2Q8NGJ4 325 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 HDAC2Q92769 488 aaKnown RBP13.63□□□□□ -0.23
COL11A1-204ENST00000427239 PLEKHA8Q96JA3 519 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 MBOAT4Q96T53 435 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 B3GAT2Q9NPZ5 323 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 GLTPQ9NZD2 209 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 UPB1Q9UBR1 384 aa13.63□□□□□ -0.23
COL11A1-204ENST00000427239 NDRG4Q9ULP0 352 aaKnown RBP13.63□□□□□ -0.23
COL11A1-204ENST00000427239 MYO7BQ6PIF6 2116 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 ALPK2Q86TB3 2170 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 H0YAE9 185 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 SURF4O15260 269 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 SMNDC1O75940 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL11A1-204ENST00000427239 CDKN2AP42771 156 aaKnown RBP13.62□□□□□ -0.23
COL11A1-204ENST00000427239 HSPA13P48723 471 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 KEAP1Q14145 624 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 SNAPC1Q16533 368 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 TSPO2Q5TGU0 170 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 CARD17Q5XLA6 110 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 C12orf73Q69YU5 71 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 XKRXQ6PP77 449 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 Q6ZT83 130 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 BEND4Q6ZU67 534 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 MRGPRGQ86SM5 289 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 UBE2J2Q8N2K1 259 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 SYT14Q8NB59 555 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 OR4K13Q8NH42 304 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 LILRB4Q8NHJ6 448 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 TRUB1Q8WWH5 349 aaKnown RBP13.62□□□□□ -0.23
COL11A1-204ENST00000427239 TMEM54Q969K7 222 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 NMNAT3Q96T66 252 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 SLC7A10Q9NS82 523 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 ASB6Q9NWX5 421 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 TVP23BQ9NYZ1 205 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 VSX1Q9NZR4 365 aaPredicted RBP13.62□□□□□ -0.23
COL11A1-204ENST00000427239 MALT1Q9UDY8 824 aa13.62□□□□□ -0.23
COL11A1-204ENST00000427239 SLC22A23A1A5C7 686 aa13.61□□□□□ -0.23
COL11A1-204ENST00000427239 RPL36A-HNRNPH2H7BZ11 118 aa13.61□□□□□ -0.23
COL11A1-204ENST00000427239 RENP00797 406 aa13.61□□□□□ -0.23
COL11A1-204ENST00000427239 ZNF3P17036 446 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms