RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 OR1L4Q8NGR5 311 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 C10orf35Q96D05 121 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 SLC41A3Q96GZ6 507 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ITCHQ96J02 903 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 CYYR1Q96J86 154 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ZBTB18Q99592 522 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NRTNQ99748 197 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NRIP2Q9BQI9 281 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 PELOQ9BRX2 385 aaKnown RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 TRIM62Q9BVG3 475 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 API5Q9BZZ5 524 aaKnown RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NT5C3AQ9H0P0 336 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 GBA3Q9H227 469 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NXF3Q9H4D5 531 aaKnown RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 AZI2Q9H6S1 392 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 YY1AP1Q9H869 796 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 MCCC2Q9HCC0 563 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 DAZ3Q9NR90 486 aaKnown RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 MMP26Q9NRE1 261 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 GIN1Q9NXP7 522 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 QPCTLQ9NXS2 382 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 CACNG2Q9Y698 323 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 THSD7BQ9C0I4 1608 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 SLIT3O75094 1523 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NFAT5O94916 1531 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ABCC6O95255 1503 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 RGS12O14924 1447 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ADGRL3Q9HAR2 1447 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 COL18A1P39060 1754 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 AFDNP55196 1824 aaKnown RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 XIRP1Q702N8 1843 aaKnown RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 FLT4P35916 1363 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 IBTKQ9P2D0 1353 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 PKD1L3Q7Z443 1732 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 PARP4Q9UKK3 1724 aaKnown RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 A0A1B0GUA9 196 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ARHGEF35A5YM69 484 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 CCDC182A6NF36 153 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 OR5B21A6NL26 309 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 PANO1I0J062 215 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 HSD17B6O14756 317 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 NBR2O15453 112 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 FAM189A1O60320 539 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 B4GALT2O60909 372 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 TSPAN12O95859 305 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 CHTF8P0CG12 524 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 HPGDP15428 266 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 NCF2P19878 526 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 CCNE1P24864 410 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 NUDT1P36639 197 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 DDOSTP39656 456 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 CTRLP40313 264 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 CSNK1DP48730 415 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 CRYBB1P53674 252 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 DLX1P56177 255 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 SEC61GP60059 68 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 OGDHQ02218 1023 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ACVR1Q04771 509 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF763Q0D2J5 394 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 SCRN3Q0VDG4 424 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 MRPL28Q13084 256 aaKnown RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 PDIA2Q13087 525 aaKnown RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF658BQ4V348 819 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 PHYHD1Q5SRE7 291 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 OR2A2Q6IF42 318 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 LRRC31Q6UY01 552 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF620Q6ZNG0 422 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 RFLNAQ6ZTI6 216 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 RALGPS2Q86X27 583 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ITPRIPQ8IWB1 547 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 MFSD6LQ8IWD5 586 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 TMEM61Q8N0U2 210 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ZCCHC7Q8N3Z6 543 aaKnown RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 FAM83FQ8NEG4 500 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 OR8J1Q8NGP2 316 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 PYROXD1Q8WU10 500 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 RNF138Q8WVD3 245 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 NDRG1Q92597 394 aaKnown RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 MYDGFQ969H8 173 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF799Q96GE5 643 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 SLC35E1Q96K37 410 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 IFT74Q96LB3 600 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 OXGR1Q96P68 337 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 MTMR9Q96QG7 549 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 PANX2Q96RD6 677 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 FMO2Q99518 471 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 OR11A1Q9GZK7 315 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 C20orf85Q9H1P6 137 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 PPA2Q9H2U2 334 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 NMRAL1Q9HBL8 299 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 SGK2Q9HBY8 427 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 MRPL47Q9HD33 250 aaKnown RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 IL26Q9NPH9 171 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF331Q9NQX6 463 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 COX16Q9P0S2 106 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 SUN2Q9UH99 717 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF223Q9UK11 482 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-208ENST00000427110 NEUROG3Q9Y4Z2 214 aa1.64□□□□□ -2.15
PTPRC-208ENST00000427110 N6AMT1Q9Y5N5 214 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms