RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 KIF26AQ9ULI4 1882 aaPredicted RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 FAM221BA6H8Z2 402 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 MTNR1BP49286 362 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 CASP6P55212 293 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 ZXDAP98168 799 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 CHAF1BQ13112 559 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 LINC00303Q3SY05 128 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 RNF212Q495C1 297 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 NCMAPQ5T1S8 102 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 CPOQ8IVL8 374 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 OR6V1Q8N148 313 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 FAM26EQ8N5C1 309 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 ACBD7Q8N6N7 88 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 INO80EQ8NBZ0 244 aaPredicted RBP14.62□□□□□ -0.07
PKP4-205ENST00000426248 OR5W2Q8NH69 310 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 LGALS14Q8TCE9 139 aa14.62□□□□□ -0.07
PKP4-205ENST00000426248 HLA-DQA2P01906 255 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 SNRNP70P08621 437 aaKnown RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 CPT2P23786 658 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 FAUP35544 74 aaKnown RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 RPS27AP62979 156 aaKnown RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 UBA52P62987 128 aaKnown RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 SLC36A2Q495M3 483 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 ACSM3Q53FZ2 586 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 FIGNL1Q6PIW4 674 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 ZC3H14Q6PJT7 736 aaKnown RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 ZNF565Q8N9K5 539 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 MAFIPQ8WZ33 124 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 PRO3102Q9H379 93 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 KLF2Q9Y5W3 355 aaPredicted RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 TMEM218A2RU14 115 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 FRS3O43559 492 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 BDKRB2P30411 391 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 GPR4P46093 362 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 ODF4Q2M2E3 257 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 FAM69AQ5T7M9 428 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 ALKBH2Q6NS38 261 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 BEND4Q6ZU67 534 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 POGLUT1Q8NBL1 392 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 SMAP2Q8WU79 429 aaPredicted RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 PIGQQ9BRB3 760 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 SLITRK2Q9H156 845 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 MED20Q9H944 212 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 C1GALT1Q9NS00 363 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 LHX6Q9UPM6 363 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 NOP16Q9Y3C1 178 aaKnown RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 AQP2P41181 271 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 NPBWR1P48145 328 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 HLA-BQ31612 363 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 LRRC56Q8IYG6 542 aaPredicted RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 BBS1Q8NFJ9 593 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 BAHD1Q8TBE0 780 aaPredicted RBP14.61□□□□□ -0.07
PKP4-205ENST00000426248 ARL11Q969Q4 196 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 PLA2G12AQ9BZM1 189 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 SYNPO2LQ9H987 977 aa14.61□□□□□ -0.07
PKP4-205ENST00000426248 SOCS6O14544 535 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 GCM2O75603 506 aaPredicted RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 G0S2P27469 103 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 PEBP1P30086 187 aaKnown RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 EEF1A1P68104 462 aaKnown RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 EEF1A2Q05639 463 aaKnown RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 EEF1A1P5Q5VTE0 462 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 ZNF793Q6ZN11 406 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 OR10H5Q8NGA6 315 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 ZFPM2Q8WW38 1151 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 DMRTA2Q96SC8 542 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 SLC25A18Q9H1K4 315 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 FAM60AQ9NP50 221 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 HELZP42694 1942 aaKnown RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 HPP00738 406 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 NR2C1P13056 603 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 DLSTP36957 453 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 SKP2Q13309 424 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 PRAMEF17Q5VTA0 474 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 PRSS41Q7RTY9 318 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 LSRQ86X29 649 aaPredicted RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 COMMD2Q86X83 199 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 SARGQ9BW04 601 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 GLIPR2Q9H4G4 154 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 ZSCAN32Q9NX65 697 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 CACNA1DQ01668 2161 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 ICOSLGO75144 302 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 DCTDP32321 178 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 RPL4P36578 427 aaKnown RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 RGS8P57771 180 aaPredicted RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 AIMP2Q13155 320 aaKnown RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 PDZD11Q5EBL8 140 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 PGAP1Q75T13 922 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 TMEM200AQ86VY9 491 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 NAXDQ8IW45 347 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 OR56A1Q8NGH5 318 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 GOT1L1Q8NHS2 421 aaPredicted RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 HAVCR2Q8TDQ0 301 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 CCDC74AQ96AQ1 378 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 ORAI1Q96D31 301 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 VRK1Q99986 396 aaPredicted RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 ISYNA1Q9NPH2 558 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 SF3B6Q9Y3B4 125 aaKnown RBP14.6□□□□□ -0.07
PKP4-205ENST00000426248 RNF215Q9Y6U7 377 aa14.6□□□□□ -0.07
PKP4-205ENST00000426248 IGKV1-8A0A0C4DH67 115 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms