RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 PSTPIP1O43586 416 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 VEGFDO43915 354 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 FAM189A1O60320 539 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 SLC22A5O76082 557 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 TTC4O95801 387 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 GUCA1CO95843 209 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 PTTG1O95997 202 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CD5P06127 495 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CDK1P06493 297 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 APOA4P06727 396 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 SERPINA6P08185 405 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 SERPINF2P08697 491 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ABHD2P08910 425 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 MYL2P10916 166 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 IL7P13232 177 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 GNSP15586 552 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 PSMA2P25787 234 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 UCP1P25874 307 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ADSSP30520 456 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 OR1D2P34982 312 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 POLR2IP36954 125 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 GPX4P36969 197 aaPredicted RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CSKP41240 450 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CAV2P51636 162 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CAPZA1P52907 286 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 GBX2P52951 348 aaPredicted RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 RPL10AP62906 217 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ERVK-8P63133 956 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 RBP5P82980 135 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 GABPAQ06546 454 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 PPIL2Q13356 520 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 COTL1Q14019 142 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 STXBP2Q15833 593 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF181Q2M3W8 571 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 TYSND1Q2T9J0 566 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 SBK1Q52WX2 424 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 FBXO48Q5FWF7 155 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 TOR1AIP1Q5JTV8 583 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 PDPK2PQ6A1A2 396 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 KDM4DQ6B0I6 523 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 RHBDD2Q6NTF9 364 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 XKRXQ6PP77 449 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 GDPD3Q7L5L3 318 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 NT5DC3Q86UY8 548 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CLEC4FQ8N1N0 589 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ANKFN1Q8N957 763 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 DNAAF3Q8N9W5 541 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 OR7G3Q8NG95 312 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 MAGEE2Q8TD90 523 aaPredicted RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 RNF139Q8WU17 664 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 PHF10Q8WUB8 498 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 RAB2BQ8WUD1 216 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 DUS3LQ96G46 650 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CAPNS2Q96L46 248 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 GLT1D1Q96MS3 346 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ZBTB18Q99592 522 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 SSX3Q99909 188 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 FAM173AQ9BQD7 235 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 BCL7BQ9BQE9 202 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF251Q9BRH9 671 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 TUBGCP2Q9BSJ2 902 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF416Q9BWM5 594 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ROGDIQ9GZN7 287 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 POLR1EQ9GZS1 481 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 RACGAP1Q9H0H5 632 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 TRABDQ9H4I3 376 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 COG4Q9H9E3 785 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 XPNPEP1Q9NQW7 623 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ZC4H2Q9NQZ6 224 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 C20orf96Q9NUD7 363 aaPredicted RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 DDX28Q9NUL7 540 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 HPF1Q9NWY4 346 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CMTM6Q9NX76 183 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 THUMPD1Q9NXG2 353 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 NINJ2Q9NZG7 142 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CD274Q9NZQ7 290 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 MTRRQ9UBK8 725 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 TRMT6Q9UJA5 497 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ZNF229Q9UJW7 825 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 STOML2Q9UJZ1 356 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 FBXO5Q9UKT4 447 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 RAB23Q9ULC3 237 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 LIPT1Q9Y234 373 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 AP1M2Q9Y6Q5 423 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 LRP6O75581 1613 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CICQ96RK0 1608 aaPredicted RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ZFC3H1O60293 1989 aaKnown RBP2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ARHGAP21Q5T5U3 1957 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CRB1P82279 1406 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 MAST2Q6P0Q8 1798 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 MON2Q7Z3U7 1717 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 PEAK1Q9H792 1746 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 COL1A2P08123 1366 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 CNTNAP1P78357 1384 aa2.48□□□□□ -2.01
LINC01040-201ENST00000425048 ITGB4P16144 1822 aa2.47□□□□□ -2.01
LINC01040-201ENST00000425048 SIPA1L3O60292 1781 aaPredicted RBP2.47□□□□□ -2.01
LINC01040-201ENST00000425048 SCN11AQ9UI33 1791 aa2.47□□□□□ -2.01
LINC01040-201ENST00000425048 IGKV1D-17A0A075B6S4 117 aa2.47□□□□□ -2.01
LINC01040-201ENST00000425048 A0A087X0T9 212 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms