RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PMPCAQ10713 525 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 MAD2L1BPQ15013 274 aaPredicted RBP11.92□□□□□ -0.5
PRPF39-202ENST00000424478 JAZF1Q86VZ6 243 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF786Q8N393 782 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 BPIFB6Q8NFQ5 453 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 C8orf4Q9NR00 106 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 NOX1Q9Y5S8 564 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 OR14I1A6ND48 311 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 RPSAP08865 295 aaKnown RBP11.91□□□□□ -0.5
PRPF39-202ENST00000424478 CTLA4P16410 223 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 CDAP32320 146 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 PER3P56645 1201 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 ZP4Q12836 540 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 KEAP1Q14145 624 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 LINGO2Q7L985 606 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 GPX7Q96SL4 187 aaPredicted RBP11.91□□□□□ -0.5
PRPF39-202ENST00000424478 CMC2Q9NRP2 79 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 PRSS50Q9UI38 385 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 RASD1Q9Y272 281 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 RIIAD1A6NNX1 92 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 H0YAE9 185 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 H0YJX3 145 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 XKRYO14609 159 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 PRRG2O14669 202 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 HCCSP53701 268 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 RPS7P62081 194 aaKnown RBP11.91□□□□□ -0.5
PRPF39-202ENST00000424478 MVKQ03426 396 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 PDK3Q15120 406 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 MEP1BQ16820 701 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 SOWAHCQ53LP3 525 aaPredicted RBP11.91□□□□□ -0.5
PRPF39-202ENST00000424478 RPL13AP3Q6NVV1 102 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 CXXC5Q7LFL8 322 aaKnown RBP11.91□□□□□ -0.5
PRPF39-202ENST00000424478 AAED1Q7RTV5 226 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 ADGRE4PQ86SQ3 457 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 OR6V1Q8N148 313 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 OR6K6Q8NGW6 343 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 SLC38A2Q96QD8 506 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 OR2M2Q96R28 347 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 RNF122Q9H9V4 155 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 NOSIPQ9Y314 301 aaKnown RBP11.91□□□□□ -0.5
PRPF39-202ENST00000424478 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
PRPF39-202ENST00000424478 TVP23AA6NH52 213 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 SLC16A7O60669 478 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 GABRB1P18505 474 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 MYF6P23409 242 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 CDK5R2Q13319 367 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 MED21Q13503 144 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 THAP5Q7Z6K1 395 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 ZMYND19Q96E35 227 aaPredicted RBP11.91□□□□□ -0.5
PRPF39-202ENST00000424478 APOL4Q9BPW4 351 aa11.91□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF726A6NNF4 738 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 ADRA2AP08913 450 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 HSPA13P48723 471 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 TSC22D1Q15714 1073 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 TSPO2Q5TGU0 170 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF511Q8NB15 262 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 RHOXF1Q8NHV9 184 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 KLHL9Q9P2J3 617 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 ENOPH1Q9UHY7 261 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 PTGES3LE9PB15 166 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 ARPC3O15145 178 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 C1QL1O75973 258 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 EDN3P14138 238 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 ACADSP16219 412 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF3P17036 446 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 AGTR1P30556 359 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 GRK5P34947 590 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 CDH15P55291 814 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 CLRN1P58418 232 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 EFNB1P98172 346 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 APOFQ13790 326 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 C1orf185Q5T7R7 199 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 B3GNT6Q6ZMB0 384 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 FJX1Q86VR8 437 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 OR6N1Q8NGY5 312 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 TMEM163Q8TC26 289 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF566Q969W8 418 aa11.9□□□□□ -0.5
PRPF39-202ENST00000424478 SLC22A23A1A5C7 686 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 PRSS37A4D1T9 235 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 FIGNL2A6NMB9 653 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 PRR23D1E9PI22 279 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 FZD7O75084 574 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 PGA4P0DJD7 388 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 PGA3P0DJD8 388 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 PRR23D2P0DMB1 279 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 GNLYP22749 145 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 DAP3P51398 398 aaKnown RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 UBE2J2Q8N2K1 259 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF582Q96NG8 517 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 TTYH2Q9BSA4 534 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 TAS2R16Q9NYV7 291 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 HTR3EA5X5Y0 456 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 AHRRA9YTQ3 701 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 MRPL33O75394 65 aaKnown RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF432O94892 652 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 NAA10P41227 235 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 LRFN4Q6PJG9 635 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 ADPRHL1Q8NDY3 354 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms