RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 ZNF813Q6ZN06 617 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 MBOAT2Q6ZWT7 520 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 TGIF2LYQ8IUE0 185 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 FBXL14Q8N1E6 418 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 ARHGAP24Q8N264 748 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 RBM15BQ8NDT2 890 aaKnown RBP9.56□□□□□ -0.88
USP49-204ENST00000423567 LILRB1Q8NHL6 650 aaPredicted RBP9.56□□□□□ -0.88
USP49-204ENST00000423567 NEUROG1Q92886 237 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 TRMT61AQ96FX7 289 aaKnown RBP9.56□□□□□ -0.88
USP49-204ENST00000423567 PERPQ96FX8 193 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 PYURFQ96I23 114 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 SLC38A2Q96QD8 506 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 DHRS9Q9BPW9 319 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 NMNAT1Q9HAN9 279 aaPredicted RBP9.56□□□□□ -0.88
USP49-204ENST00000423567 GLTPQ9NZD2 209 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 CD300AQ9UGN4 299 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 TMEM5Q9Y2B1 443 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 ATP23Q9Y6H3 246 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 V9GYQ6 96 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 CENPBD1B2RD01 187 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 hCG_2039718K7EN88 272 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 FFAR1O14842 300 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 ARPC2O15144 300 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 SEC14L2O76054 403 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 FARS2O95363 451 aaKnown RBP9.55□□□□□ -0.88
USP49-204ENST00000423567 STAMBPO95630 424 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 CD99P14209 185 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 MSX2P35548 267 aaPredicted RBP9.55□□□□□ -0.88
USP49-204ENST00000423567 ARR3P36575 388 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 FABP6P51161 128 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 SMIM11AP58511 58 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 TUBA1BP68363 451 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 TUBA4AP68366 448 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 SPOCK1Q08629 439 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 FXNQ16595 210 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 C3orf36Q3SXR2 165 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 PHYHD1Q5SRE7 291 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 ZNF544Q6NX49 715 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 TUBA1AQ71U36 451 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 OAFQ86UD1 273 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 FAM169BQ8N8A8 192 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 MOSPD2Q8NHP6 518 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 BCAS4Q8TDM0 211 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 TMEM54Q969K7 222 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 ZNF837Q96EG3 531 aaPredicted RBP9.55□□□□□ -0.88
USP49-204ENST00000423567 FOXB1Q99853 325 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 GSX2Q9BZM3 304 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 MAN2C1Q9NTJ4 1040 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 FAM53CQ9NYF3 392 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 NDUFAF4Q9P032 175 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 HIF3AQ9Y2N7 669 aa9.55□□□□□ -0.88
USP49-204ENST00000423567 HRNRQ86YZ3 2850 aaPredicted RBP9.54□□□□□ -0.88
USP49-204ENST00000423567 A0A087WUU8 490 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 A0A1W2PRQ8 180 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 ATP6V1G2-DDX39BF2Z307 99 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 DHHO43323 396 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 PRSS23O95084 383 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 UBL3O95164 117 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 RAB36O95755 333 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 FABP3P05413 133 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 SOD3P08294 240 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 QDPRP09417 244 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 DANCRP0C864 163 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 PGA4P0DJD7 388 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 PGA3P0DJD8 388 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 CD79AP11912 226 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 BMP4P12644 408 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 B4GALT1P15291 398 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 CBR1P16152 277 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 MAKP20794 623 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 TTKP33981 857 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 PTH2RP49190 550 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 ZNF84P51523 738 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 IDH3GP51553 393 aaPredicted RBP9.54□□□□□ -0.88
USP49-204ENST00000423567 ATP5J2P56134 94 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 ADAM8P78325 824 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 NPRL3Q12980 569 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 TOP3AQ13472 1001 aaPredicted RBP9.54□□□□□ -0.88
USP49-204ENST00000423567 DGCR6Q14129 220 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 PGGHGQ32M88 737 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 MTX3Q5HYI7 312 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 FAM205BPQ63HN1 556 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 TBPL2Q6SJ96 375 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 ZNF627Q7L945 461 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 PIWIL3Q7Z3Z3 882 aaKnown RBP9.54□□□□□ -0.88
USP49-204ENST00000423567 MUC15Q8N387 334 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 NOXO1Q8NFA2 376 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 IL17RDQ8NFM7 739 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 OR51A7Q8NH64 312 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 ASB10Q8WXI3 467 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 KATNB1Q9BVA0 655 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 TXNIPQ9H3M7 391 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 NELFAQ9H3P2 528 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 MUC13Q9H3R2 512 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 CRNNQ9UBG3 495 aaPredicted RBP9.54□□□□□ -0.88
USP49-204ENST00000423567 FBXL3Q9UKT7 428 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 MOKQ9UQ07 419 aa9.54□□□□□ -0.88
USP49-204ENST00000423567 AURKCQ9UQB9 309 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms