RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 DTX2Q86UW9 622 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM151AQ8N4L1 468 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CPSF7Q8N684 471 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NECAP1Q8NC96 275 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 C11orf65Q8NCR3 313 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TM4SF19Q96DZ7 209 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RAX2Q96IS3 184 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 MMP27Q9H306 513 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NELFAQ9H3P2 528 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NT5DC2Q9H857 520 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 MBNL1Q9NR56 388 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 FBXO6Q9NRD1 293 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 UBQLN4Q9NRR5 601 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PNPLA3Q9NST1 481 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RABL2AQ9UBK7 228 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 EXTL2Q9UBQ6 330 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RABL2BQ9UNT1 228 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CDH10Q9Y6N8 788 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF318Q5VUA4 2279 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PTPN13Q12923 2485 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 IGKV6-21A0A0C4DH24 114 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 AQP7P3A6NL99 342 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RNASEK-C17orf49H0YIS7 233 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 P2RY10O00398 339 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RIPK2O43353 540 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 KCNAB3O43448 404 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PCDH7O60245 1069 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 SAP30O75446 220 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 SCAF4O95104 1147 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NXPH2O95156 264 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NDUFB8O95169 186 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF682O95780 498 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 IL18BPO95998 194 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 DBIP07108 87 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 THBDP07204 575 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 SRD5A2P31213 254 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CEACAM8P31997 349 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 UQCRFS1P47985 274 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PITPNBP48739 271 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 GSK3AP49840 483 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PMS2P11Q13670 270 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CYTH1Q15438 398 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TCTN1Q2MV58 587 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ALKBH6Q3KRA9 238 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PHYHD1Q5SRE7 291 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PLAG1Q6DJT9 500 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 GSG1LQ6UXU4 331 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 SAT2Q96F10 170 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NSL1Q96IY1 281 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RDH12Q96NR8 316 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 OR5M11Q96RB7 305 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CSF3RQ99062 836 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CHCHD6Q9BRQ6 235 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 OR11A1Q9GZK7 315 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 GAL3ST2Q9H3Q3 398 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NRN1Q9NPD7 142 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TAS2R1Q9NYW7 299 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 THYN1Q9P016 225 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 GNG12Q9UBI6 72 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ICKQ9UPZ9 632 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 IGF2RP11717 2491 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 IGKV6D-21A0A0A0MT36 114 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 FEZF1A0PJY2 475 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 NPEPPSL1A6NEC2 478 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 AZIN1O14977 448 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 SCO1O75880 301 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PROSCO94903 275 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TFPTP0C1Z6 253 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RFPL3SP0C7P2 107 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 FCGR1AP12314 374 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 HTN3P15516 51 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 JUNBP17275 347 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 BLVRBP30043 206 aaPredicted RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CDKN1BP46527 198 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 FOXF2Q12947 444 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RSU1Q15404 277 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ZDHHC24Q6UX98 284 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 LRRC34Q8IZ02 419 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 DTWD1Q8N5C7 304 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 C1orf52Q8N6N3 182 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 OR1J1Q8NGS3 322 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF480Q8WV37 535 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 LINC01599Q8WXQ3 324 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 CNOT9Q92600 299 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PIWIL1Q96J94 861 aaKnown RBP3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TTTY12Q9BZ98 90 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 PBOV1Q9GZY1 135 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 VRTNQ9H8Y1 702 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 AP5S1Q9NUS5 200 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 TREM2Q9NZC2 230 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 P2RX2Q9UBL9 471 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ZFP69BQ9UJL9 534 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 OSGIN1Q9UJX0 560 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 DAPP1Q9UN19 280 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 SESN1Q9Y6P5 492 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 BLOC1S5-TXNDC5H3BN57 136 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 ST8SIA5O15466 376 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 C6orf47O95873 294 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 RBP4P02753 201 aa3.2□□□□□ -1.9
TOP2A-201ENST00000423485 GRPP07492 148 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms