RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 A0A1W2PPW3 197 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 LRRN3E7EW58 273 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 PLPP3O14495 311 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 IGFBP1P08833 259 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-205ENST00000423214 GLRXP35754 106 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 ALDH3B1P43353 468 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 GPR6P46095 362 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-205ENST00000423214 GIPRP48546 466 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 BIDP55957 195 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 RAB1AP62820 205 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 CYP51A1Q16850 503 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 DLEU7Q6UYE1 221 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 SMYD1Q8NB12 490 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 MCHR1Q99705 422 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 RABEP2Q9H5N1 569 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 NARFLQ9H6Q4 476 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 SLC7A8Q9UHI5 535 aa13.9□□□□□ -0.18
COL18A1-205ENST00000423214 WNK2Q9Y3S1 2297 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 B4DSR2 109 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 M0R3H8 397 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 CHP2O43745 196 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 VIMP08670 466 aaKnown RBP13.89□□□□□ -0.19
COL18A1-205ENST00000423214 SAGP10523 405 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF35P13682 527 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 GPX2P18283 190 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 TCN1P20061 433 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-205ENST00000423214 DVL1P1P54792 670 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-205ENST00000423214 MAD2L1BPQ15013 274 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-205ENST00000423214 MSMPQ1L6U9 139 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF613Q6PF04 617 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 C11orf65Q8NCR3 313 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 CPPED1Q9BRF8 314 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF385DQ9H6B1 395 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF224Q9NZL3 707 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF346Q9UL40 294 aaKnown RBP13.89□□□□□ -0.19
COL18A1-205ENST00000423214 FZR1Q9UM11 496 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 TRIM33Q9UPN9 1127 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 NDUFAF1Q9Y375 327 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 GMEB1Q9Y692 573 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 DYSFO75923 2080 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 TANC2Q9HCD6 1990 aa13.89□□□□□ -0.19
COL18A1-205ENST00000423214 CPSF4LA6NMK7 179 aaKnown RBP13.88□□□□□ -0.19
COL18A1-205ENST00000423214 FMO6PO60774 539 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 FARS2O95363 451 aaKnown RBP13.88□□□□□ -0.19
COL18A1-205ENST00000423214 HPXP02790 462 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 OPN1SWP03999 348 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 ITGA2P17301 1181 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 ACHEP22303 614 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 RAB39AQ14964 217 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 NKPD1Q17RQ9 610 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 RUNDC3AQ59EK9 446 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 ELFN2Q5R3F8 820 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 SHQ1Q6PI26 577 aaKnown RBP13.88□□□□□ -0.19
COL18A1-205ENST00000423214 SLC35D2Q76EJ3 337 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 PIWIL3Q7Z3Z3 882 aaKnown RBP13.88□□□□□ -0.19
COL18A1-205ENST00000423214 RETREG3Q86VR2 466 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 WDFY1Q8IWB7 410 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 RDH5Q92781 318 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF566Q969W8 418 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 C1orf159Q96HA4 380 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF75AQ96N20 296 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 TMEM120AQ9BXJ8 343 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 MYEF2Q9P2K5 600 aaKnown RBP13.88□□□□□ -0.19
COL18A1-205ENST00000423214 DUSP13Q9UII6 198 aa13.88□□□□□ -0.19
COL18A1-205ENST00000423214 LEF1Q9UJU2 399 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-205ENST00000423214 KPNA4O00629 521 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-205ENST00000423214 ANGPT2O15123 496 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 RNF13O43567 381 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 TPST2O60704 377 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 MFN2O95140 757 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 TFP02787 698 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 UMPSP11172 480 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 SEC24CP53992 1094 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 SELENOVP59797 346 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 SCGB2A2Q13296 93 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 SELPLGQ14242 412 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 MELKQ14680 651 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 FXNQ16595 210 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 ENTPD8Q5MY95 495 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 RGS7BPQ6MZT1 257 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-205ENST00000423214 TTC33Q6PID6 262 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-205ENST00000423214 DHDDSQ86SQ9 333 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 LRP11Q86VZ4 500 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 OR6X1Q8NH79 312 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 CLDND2Q8NHS1 167 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 VANGL1Q8TAA9 524 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-205ENST00000423214 SNX33Q8WV41 574 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 STON2Q8WXE9 905 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 ARHGDIGQ99819 225 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 WFDC6Q9BQY6 131 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF416Q9BWM5 594 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 OCEL1Q9H607 264 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 RNF121Q9H920 327 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 CDH20Q9HBT6 801 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 LPAR2Q9HBW0 351 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 NANSQ9NR45 359 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 ZNF275Q9NSD4 429 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-205ENST00000423214 FGFR1OP2Q9NVK5 253 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 GLTPQ9NZD2 209 aa13.87□□□□□ -0.19
COL18A1-205ENST00000423214 GPR160Q9UJ42 338 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms