RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 LACC1Q8IV20 430 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 SLC37A3Q8NCC5 494 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 FAM46BQ96A09 425 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 MIB2Q96AX9 1013 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 SLC19A3Q9BZV2 496 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF350Q9GZX5 532 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 RAB33BQ9H082 229 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 SLC25A18Q9H1K4 315 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 SLC22A11Q9NSA0 550 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 KCNIP1Q9NZI2 227 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 OR14J1Q9UGF5 321 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF850A8MQ14 1090 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 RGS9O75916 674 aaPredicted RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 GP1BAP07359 652 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 QDPRP09417 244 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 GABRA2P47869 451 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 ZFP36L2P47974 494 aaKnown RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 EIF2B2P49770 351 aaKnown RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 DSCR4P56555 118 aaPredicted RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 RPL27P61353 136 aaKnown RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 TUBA3CQ13748 450 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 RAB11BQ15907 218 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 CHRFAM7AQ494W8 412 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 NHSL2Q5HYW2 709 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 DCAF10Q5QP82 559 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 JMJD6Q6NYC1 403 aaPredicted RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 SLC22A25Q6T423 547 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF321PQ8N8H1 164 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 ASCC1Q8N9N2 400 aaKnown RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 PAPD5Q8NDF8 572 aaKnown RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 OR5D14Q8NGL3 314 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 C17orf50Q8WW18 174 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 VOPP1Q96AW1 172 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 ANKRD19PQ9H560 264 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 TUBA8Q9NY65 449 aaPredicted RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 SOCS6O14544 535 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 IGFBP1P08833 259 aaPredicted RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 UCNP55089 124 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 SOX8P57073 446 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 SPOCK1Q08629 439 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 EBPQ15125 230 aaKnown RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 MEP1BQ16820 701 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 PRSS53Q2L4Q9 553 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF658BQ4V348 819 aaPredicted RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 TIGD3Q6B0B8 471 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 CHDHQ8NE62 594 aaPredicted RBP8.85□□□□□ -0.99
CMSS1-201ENST00000421999 GPR32P1Q8NGA4 272 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 OR2V1Q8NHB1 315 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 LHX6Q9UPM6 363 aa8.85□□□□□ -0.99
CMSS1-201ENST00000421999 CDHR4A6H8M9 788 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 OR5H15A6NDH6 313 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 OR6C70A6NIJ9 312 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 NKX2-8O15522 239 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 RBBP9O75884 186 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 EDN3P14138 238 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 RAB3AP20336 220 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 CD82P27701 267 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ARHGDIBP52566 201 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 EMP3P54852 163 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 MC2RQ01718 297 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF584Q8IVC4 421 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 FOXRED2Q8IWF2 684 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 CISD2Q8N5K1 135 aaKnown RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 FAM181AQ8N9Y4 354 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 GJC3Q8NFK1 279 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 OR13C9Q8NGT0 318 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 FAM131CQ96AQ9 280 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ALKBH3Q96Q83 286 aaPredicted RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 RASL10BQ96S79 203 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF696Q9H7X3 374 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 B3GALT5Q9Y2C3 310 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 GPR55Q9Y2T6 319 aaPredicted RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ATP6V1G1O75348 118 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ITGAMP11215 1152 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ACSM3Q53FZ2 586 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF691Q5VV52 312 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 UGT2A3Q6UWM9 527 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 BCDIN3DQ7Z5W3 292 aaKnown RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 SLC43A2Q8N370 569 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 HSD17B8Q92506 261 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 DUS3LQ96G46 650 aaKnown RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ZNF764Q96H86 408 aaPredicted RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 MED28Q9H204 178 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 BABAM2Q9NXR7 383 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 PTTG2Q9NZH5 202 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ASH2LQ9UBL3 628 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 FBXO9Q9UK97 447 aaPredicted RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 MOKQ9UQ07 419 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 DOPEY2Q9Y3R5 2298 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 RBM34P42696 430 aaKnown RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ID4P47928 161 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 PSG6Q00889 435 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 RPL18Q07020 188 aaKnown RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 MZT1Q08AG7 82 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 KDM4DQ6B0I6 523 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ESPNLQ6ZVH7 1005 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 VASH1Q7L8A9 365 aaPredicted RBP8.84□□□□□ -0.99
CMSS1-201ENST00000421999 CASTOR1Q8WTX7 329 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 CA5BP1Q8WTZ4 195 aa8.84□□□□□ -0.99
CMSS1-201ENST00000421999 ASB17Q8WXJ9 295 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms