RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 SLCO1B7G3V0H7 640 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 UBDO15205 165 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 MPZL1O95297 269 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 PNPP00491 289 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 TFP02787 698 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 THY1P04216 161 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 SERPINA5P05154 406 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ADORA3P0DMS8 318 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ARAFP10398 606 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 PCMT1P22061 227 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 PRKAR1BP31321 381 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 CSNK1A1P48729 337 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 COMPP49747 757 aaPredicted RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 TMEM33P57088 247 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 HILS1P60008 231 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 MYBPC1Q00872 1141 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 PUDPQ08623 228 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 TSTQ16762 297 aaKnown RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 NKPD1Q17RQ9 610 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 SPRNQ5BIV9 151 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 PAGE3Q5JUK9 113 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ULK3Q6PHR2 472 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 LRFN4Q6PJG9 635 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 DHRS4L2Q6PKH6 230 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 UGT2A3Q6UWM9 527 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 NET1Q7Z628 596 aaPredicted RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 TSPYL5Q86VY4 417 aaPredicted RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 RBM45Q8IUH3 476 aaKnown RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 FUNDC1Q8IVP5 155 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 SLC22A24Q8N4F4 322 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 LRRC17Q8N6Y2 441 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ZDHHC22Q8N966 263 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 SMYD1Q8NB12 490 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ICA1LQ8NDH6 482 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ADPRHL1Q8NDY3 354 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 FAM216AQ8WUB2 273 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ZFAND2BQ8WV99 257 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 DNAJA4Q8WW22 397 aaPredicted RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 TMEM54Q969K7 222 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 SLC47A1Q96FL8 570 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 DUX5Q96PT3 197 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ASPNQ9BXN1 380 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 IKZF5Q9H5V7 419 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 RMND5AQ9H871 391 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 C12orf10Q9HB07 376 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 B3GAT2Q9NPZ5 323 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 HINT3Q9NQE9 182 aaKnown RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 SDR39U1Q9NRG7 319 aaPredicted RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 THAP1Q9NVV9 213 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 ARGLU1Q9NWB6 273 aaPredicted RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 MRPL39Q9NYK5 338 aaKnown RBP6.91□□□□□ -1.3
VIM-202ENST00000421459 ZIM2Q9NZV7 527 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 PRDM4Q9UKN5 801 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 PKD1L1Q8TDX9 2849 aa6.91□□□□□ -1.3
VIM-202ENST00000421459 TRAV20A0A0B4J274 112 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 A0A0B4J2E0 115 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 A0A1B0GX12 115 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 TMEM120BA0PK00 339 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 C17orf100A8MU93 164 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 M0R3H8 397 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 AKAP8O43823 692 aaKnown RBP6.9□□□□□ -1.3
VIM-202ENST00000421459 ERLIN1O75477 346 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 UBL3O95164 117 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 LYPD3O95274 346 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 CH25HO95992 272 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 OPN1SWP03999 348 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 LCKP06239 509 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 BMP2P12643 396 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 ETS2P15036 469 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 MAKP20794 623 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 ARFIP2P53365 341 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 RGS8P57771 180 aaPredicted RBP6.9□□□□□ -1.3
VIM-202ENST00000421459 CDK6Q00534 326 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 NPTX1Q15818 432 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 AWAT1Q58HT5 328 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 BEND6Q5SZJ8 279 aaPredicted RBP6.9□□□□□ -1.3
VIM-202ENST00000421459 SPATA46Q5T0L3 261 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 GCNT6Q5T4J0 391 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 RGS7BPQ6MZT1 257 aaPredicted RBP6.9□□□□□ -1.3
VIM-202ENST00000421459 ACSM5Q6NUN0 579 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 SLC35D2Q76EJ3 337 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 PXKQ7Z7A4 578 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 MREGQ8N565 214 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 SLC30A7Q8NEW0 376 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 OR4K5Q8NGD3 323 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 OR4D11Q8NGI4 311 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 SYNPRQ8TBG9 265 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 RNF121Q9H920 327 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 TMEM27Q9HBJ8 222 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 SLC52A3Q9NQ40 469 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 THUMPD1Q9NXG2 353 aaKnown RBP6.9□□□□□ -1.3
VIM-202ENST00000421459 TAS2R5Q9NYW4 299 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 GLTPQ9NZD2 209 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 VAPAQ9P0L0 249 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 SLC7A8Q9UHI5 535 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 OPN4Q9UHM6 478 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 WIPI2Q9Y4P8 454 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 PPIAL4AQ9Y536 164 aa6.9□□□□□ -1.3
VIM-202ENST00000421459 PCDHGB1Q9Y5G3 927 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms