RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 WIF1Q9Y5W5 379 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 B3GALT1Q9Y5Z6 326 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 FAM240BA0A1B0GVZ2 78 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 HMX3A6NHT5 357 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PLA2G10O15496 165 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SULT1B1O43704 296 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 GSTZ1O43708 216 aaPredicted RBP13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PRKNO60260 465 aaPredicted RBP13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SLC43A1O75387 559 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 IGHEP01854 428 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 HRGP04196 525 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 NR2C1P13056 603 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 MYF5P13349 255 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 P2RY14Q15391 338 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TEX30Q5JUR7 227 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 DEGS2Q6QHC5 323 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TSSK4Q6SA08 328 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 H1FNTQ75WM6 255 aaPredicted RBP13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF679Q8IYX0 411 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CELF2-AS1Q8N7Q2 184 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF511Q8NB15 262 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNRF4Q8WWF5 429 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR8B4Q96RC9 309 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TCF7L1Q9HCS4 588 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 B9D1Q9UPM9 204 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CAMK2AQ9UQM7 478 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 A0A087WZY1 265 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 IFITM5A6NNB3 132 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TIAF1O95411 115 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 LDOC1O95751 146 aaPredicted RBP13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 MNDAP41218 407 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CLDN20P56880 219 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 RAB25P57735 213 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 FBXW4P57775 412 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 BTG1P62324 171 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PHF19Q5T6S3 580 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 FAM27D1Q5T7N8 215 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 C3orf33Q6P1S2 294 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 C1orf210Q8IVY1 113 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PM20D2Q8IYS1 436 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR2G2Q8NGZ5 317 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF671Q8TAW3 534 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 NSMAFQ92636 917 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TRIM63Q969Q1 353 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SLC25A36Q96CQ1 311 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SPACA9Q96E40 222 aaPredicted RBP13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 FAM210AQ96ND0 272 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF587Q96SQ5 575 aaPredicted RBP13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PDCD1LG2Q9BQ51 273 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 MARVELD1Q9BSK0 173 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 DEFB126Q9BYW3 111 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PTGES2Q9H7Z7 377 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SRA1Q9HD15 236 aaKnown RBP13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CHST11Q9NPF2 352 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 IKZF2Q9UKS7 526 aa13.12□□□□□ -0.31
HLA-DPA1-242ENST00000419277 IGLV1-36A0A0B4J1U3 117 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SLC22A23A1A5C7 686 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 NPIPA5E9PKD4 350 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 GPR171O14626 319 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 KHNYNO15037 678 aaKnown RBP13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 EIF4EP06730 217 aaKnown RBP13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ATF1P18846 271 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 AHCYP23526 432 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CAPZA1P52907 286 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 HCCSP53701 268 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR10A3P58181 314 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZFP36L1Q07352 338 aaKnown RBP13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SLC22A10Q63ZE4 541 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TIGD3Q6B0B8 471 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 DPY19L4Q7Z388 723 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 BMPERQ8N8U9 685 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR4M1Q8NGD0 313 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR6F1Q8NGZ6 308 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ELP5Q8TE02 316 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 MAP6Q96JE9 813 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 METTL7AQ9H8H3 244 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 NOX4Q9NPH5 578 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 BRD7Q9NPI1 651 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 B3GAT2Q9NPZ5 323 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 NPIPA1Q9UND3 350 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 RPH3AQ9Y2J0 694 aaPredicted RBP13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 V9GY05 133 aa13.11□□□□□ -0.31
HLA-DPA1-242ENST00000419277 A0A0G2JMP0 313 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 A0A0X1KG70 313 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TMEM200CA6NKL6 621 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR4C45A6NMZ5 311 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 DCTN6O00399 190 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 DVL2O14641 736 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 AQP8O94778 261 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR8G3PP0DMU2 310 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SLC6A1P30531 599 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 RAG2P55895 527 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 AP3S2P59780 193 aa13.1□□□□□ -0.31
HLA-DPA1-242ENST00000419277 GPR85P60893 370 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms