RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CBLL1Q75N03 491 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 PIWIL3Q7Z3Z3 882 aaKnown RBP14.29□□□□□ -0.12
LINC00404-201ENST00000418660 VTCN1Q7Z7D3 282 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 NUP37Q8NFH4 326 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 RHNO1Q9BSD3 238 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 DENND2DQ9H6A0 471 aaPredicted RBP14.29□□□□□ -0.12
LINC00404-201ENST00000418660 C20orf141Q9NUB4 165 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 IGHV2OR16-5A0A0B4J2B6 119 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 A0A1W2PRG6 482 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 VSTM5A8MXK1 200 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 B9A039 149 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 SNX3O60493 162 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 ZNF682O95780 498 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 IFNW1P05000 195 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 F13BP05160 661 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 OR4A8P0C604 315 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 PGA4P0DJD7 388 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 PGA3P0DJD8 388 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 CD79AP11912 226 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 B4GALT1P15291 398 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 DRD4P21917 467 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 PRDX6P30041 224 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 LSP1P33241 339 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 AQP2P41181 271 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 EFNA4P52798 201 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 PSME3P61289 254 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 PIGFQ07326 219 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 EFNB3Q15768 340 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 ADIPOQQ15848 244 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 IFI44LQ53G44 452 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 VHLLQ6RSH7 139 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 CLEC2AQ6UVW9 174 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 CPLX4Q7Z7G2 160 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 OR10H5Q8NGA6 315 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 HTRA1Q92743 480 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 FAM107BQ9H098 131 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 HEATR1Q9H583 2144 aaKnown RBP14.28□□□□□ -0.12
LINC00404-201ENST00000418660 ZNF442Q9H7R0 627 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 NOX3Q9HBY0 568 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 INIPQ9NRY2 104 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 ZNF224Q9NZL3 707 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 PLCE1Q9P212 2302 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 ABCD2Q9UBJ2 740 aa14.28□□□□□ -0.12
LINC00404-201ENST00000418660 GMNCA6NCL1 334 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 CENPBD1B2RD01 187 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 DHHO43323 396 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 ENTPD5O75356 428 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 UBL3O95164 117 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 F12P00748 615 aaPredicted RBP14.27□□□□□ -0.13
LINC00404-201ENST00000418660 SERPINA1P01009 418 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 IGHG1P01857 330 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 QDPRP09417 244 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 YAP1P46937 504 aaKnown RBP14.27□□□□□ -0.13
LINC00404-201ENST00000418660 DAP3P51398 398 aaKnown RBP14.27□□□□□ -0.13
LINC00404-201ENST00000418660 CLRN1P58418 232 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 SNRPD2P62316 118 aaKnown RBP14.27□□□□□ -0.13
LINC00404-201ENST00000418660 RAB1AP62820 205 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 HIST3H3Q16695 136 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 HDDC2Q7Z4H3 204 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 SKA3Q8IX90 412 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 OFCC1Q8IZS5 231 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 MAPK1IP1LQ8NDC0 245 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 GEMIN6Q8WXD5 167 aaKnown RBP14.27□□□□□ -0.13
LINC00404-201ENST00000418660 ASB10Q8WXI3 467 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 BPIFA2Q96DR5 249 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 ZNF75AQ96N20 296 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 SEPHS2Q99611 448 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 KCTD14Q9BQ13 255 aaPredicted RBP14.27□□□□□ -0.13
LINC00404-201ENST00000418660 FNDC11Q9BVV2 318 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 MRPL13Q9BYD1 178 aaKnown RBP14.27□□□□□ -0.13
LINC00404-201ENST00000418660 FBXO9Q9UK97 447 aaPredicted RBP14.27□□□□□ -0.13
LINC00404-201ENST00000418660 SNX13Q9Y5W8 968 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 ZFHX3Q15911 3703 aa14.27□□□□□ -0.13
LINC00404-201ENST00000418660 IGHV4-30-2A0A087WSY4 118 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 MCIDASD6RGH6 385 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 PIP5K1CO60331 668 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 RAB36O95755 333 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 OR8G3PP0DMU2 310 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 IFI30P13284 250 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 ACADSP16219 412 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 ZNF14P17017 642 aaPredicted RBP14.26□□□□□ -0.13
LINC00404-201ENST00000418660 THBS4P35443 961 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 GIPRP48546 466 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 PTDSS1P48651 473 aaKnown RBP14.26□□□□□ -0.13
LINC00404-201ENST00000418660 RUNX1T1Q06455 604 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 LAPTM4AQ15012 233 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 TRAM2Q15035 370 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 FKBP9P1Q75LS8 142 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 SLC22A24Q8N4F4 322 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 ZNF525Q8N782 197 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 MOSPD2Q8NHP6 518 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 FAM162AQ96A26 154 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 MS4A3Q96HJ5 214 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 PLK3Q9H4B4 646 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 TMEM38BQ9NVV0 291 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 STX18Q9P2W9 335 aaKnown RBP14.26□□□□□ -0.13
LINC00404-201ENST00000418660 RHCGQ9UBD6 479 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 FBXL3Q9UKT7 428 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 HIF3AQ9Y2N7 669 aa14.26□□□□□ -0.13
LINC00404-201ENST00000418660 NPIPB13A6NJU9 1138 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms