RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 WACQ9BTA9 647 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 HDHD5Q9BXW7 423 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 SYT4Q9H2B2 425 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 LDAHQ9H6V9 325 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 GALNT9Q9HCQ5 603 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 TRIM64BA6NI03 449 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 PLPP2O43688 288 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 MYBPHQ13203 477 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 EIF2B1Q14232 305 aaKnown RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 FAM131AQ6UXB0 335 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 ARMC10Q8N2F6 343 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 GPR137CQ8N3F9 429 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 PTP4A1Q93096 173 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 MIB2Q96AX9 1013 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 SLC25A44Q96H78 314 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 MOGAT1Q96PD6 335 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 ABRACLQ9P1F3 81 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 A0A1W2PPL8 197 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 A0A1W2PQL4 384 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 CCDC182A6NF36 153 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 ANXA2P2A6NMY6 339 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 PRKNO60260 465 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 ANXA2P07355 339 aaKnown RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 ERCC1P07992 297 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 HNRNPA0Q13151 305 aaKnown RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 HBMQ6B0K9 141 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 SLC25A25Q6KCM7 469 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 TMEM99Q8N816 258 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 SUMF1Q8NBK3 374 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 OR6X1Q8NH79 312 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 CPNE4Q96A23 557 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 TPK1Q9H3S4 243 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 CCDC88CQ9P219 2028 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 LOC102725191A0A1B0GVB3 256 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 FABP12A6NFH5 140 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 ZNF593O00488 134 aaPredicted RBP7.56□□□□□ -1.2
USP54-203ENST00000418501 MAGEB3O15480 346 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 IFNGR1P15260 489 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 BIDP55957 195 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 TP53I3Q53FA7 332 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 ACSM3Q53FZ2 586 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 HACD4Q5VWC8 232 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 PM20D2Q8IYS1 436 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 SIRT6Q8N6T7 355 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 GDPD1Q8N9F7 314 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 SMIM19Q96E16 107 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 RHNO1Q9BSD3 238 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 NMNAT2Q9BZQ4 307 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 OR11A1Q9GZK7 315 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 C1orf198Q9H425 327 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 SEC61A2Q9H9S3 476 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 TAS2R16Q9NYV7 291 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 CHCHD2Q9Y6H1 151 aaPredicted RBP7.56□□□□□ -1.2
USP54-203ENST00000418501 NPIPB7O75200 414 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 GYPBP06028 91 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 FCGR2AP12318 317 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 RAB3BP20337 219 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 ALKBH1Q13686 389 aaKnown RBP7.56□□□□□ -1.2
USP54-203ENST00000418501 PIP4P1Q86T03 277 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 GHDCQ8N2G8 530 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 SYT14Q8NB59 555 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 RNF138Q8WVD3 245 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 SLC25A46Q96AG3 418 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 RNF31Q96EP0 1072 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 AQP7P3A6NL99 342 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 AQP8O94778 261 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 SLC2A5P22732 501 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 EIF2S3P41091 472 aaKnown RBP7.56□□□□□ -1.2
USP54-203ENST00000418501 RAC3P60763 192 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 RPS25P62851 125 aaKnown RBP7.56□□□□□ -1.2
USP54-203ENST00000418501 TAB1Q15750 504 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 GLT8D1Q68CQ7 371 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 XKRXQ6PP77 449 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 OR2V1Q8NHB1 315 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 ABHD4Q8TB40 342 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 ASB10Q8WXI3 467 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 KCNS3Q9BQ31 491 aa7.56□□□□□ -1.2
USP54-203ENST00000418501 TRAV1-2A0A0B4J238 106 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 A0A1B0GVI7 797 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 C9orf172C9J069 976 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 AKR7A3O95154 331 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 NPR2P20594 1047 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 FUT4P22083 530 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 LAP3P28838 519 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 CCR9P51686 369 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
USP54-203ENST00000418501 CDK5R1Q15078 307 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 OR1C1Q15619 314 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 VASNQ6EMK4 673 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 LCN10Q6JVE6 187 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ZNF554Q86TJ5 538 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ZNF227Q86WZ6 799 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ZNF679Q8IYX0 411 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 BEST3Q8N1M1 668 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 NOXO1Q8NFA2 376 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 FOXRED1Q96CU9 486 aaPredicted RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 CMTM3Q96MX0 182 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 CENPOQ9BU64 300 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 RHBDL2Q9NX52 303 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms