RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PPM1DO15297 605 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF208O43345 1280 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 LY86O95711 162 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 RAB3DO95716 219 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 HLA-AP01891 365 aaKnown RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 MC3RP41968 323 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 ACTR1BP42025 376 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SSR2P43308 183 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 PRKCZQ05513 592 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 PON3Q15166 354 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 Q499Y3 187 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 PRAMEF17Q5VTA0 474 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 GDPD4Q6W3E5 623 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 GALNT16Q8N428 558 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 OR51L1Q8NGJ5 315 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 GPX8Q8TED1 209 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 RNF166Q96A37 237 aaPredicted RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 ZBTB8AQ96BR9 441 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SAT2Q96F10 170 aaPredicted RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 NECAB3Q96P71 396 aaPredicted RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC22A12Q96S37 553 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 ACTRT3Q9BYD9 372 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SELENOIQ9C0D9 397 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 EPHX3Q9H6B9 360 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 TAC3Q9UHF0 121 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 YBX2Q9Y2T7 364 aaKnown RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 TIMM10BQ9Y5J6 103 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 TRAV18A0A075B6X5 111 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 H7C4K7 107 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 MFNGO00587 321 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 CD5P06127 495 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 CD2P06729 351 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 ACKR3P25106 362 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 EFNB2P52799 333 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 CLDN2P57739 230 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 EEF1A1P68104 462 aaKnown RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 REEP5Q00765 189 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 NKPD1Q17RQ9 610 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 FNDC3BQ53EP0 1204 aaKnown RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 FAM46CQ5VWP2 391 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 FAM111BQ6SJ93 734 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF793Q6ZN11 406 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SSX9Q7RTT3 188 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 FIBINQ8TAL6 211 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 NUBPLQ8TB37 319 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 C14orf144Q96I85 54 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 MYADMQ96S97 322 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 GAL3ST1Q99999 423 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 RSRP1Q9BUV0 290 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 HRH4Q9H3N8 390 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 MTHFD2LQ9H903 347 aaPredicted RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 POLE3Q9NRF9 147 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 CYTL1Q9NRR1 136 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 MARCH5Q9NX47 278 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 WSB2Q9NYS7 404 aaPredicted RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 CACFD1Q9UGQ2 172 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SERTAD3Q9UJW9 196 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 PLAGL1Q9UM63 463 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 A6NLC8 198 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 CD63P08962 238 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 RAB5AP20339 215 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 LAP3P28838 519 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 OR1Q1Q15612 314 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 EIPR1Q53HC9 387 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 TMEM205Q6UW68 189 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC24A5Q71RS6 500 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 C11orf96Q7Z7L8 435 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF565Q8N9K5 539 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 TMEM229BQ8NBD8 167 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 OR52E2Q8NGJ4 325 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 MYLIPQ8WY64 445 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC35A4Q96G79 324 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 SMIM8Q96KF7 97 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 LRFN5Q96NI6 719 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 RBM14Q96PK6 669 aaKnown RBP7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 MED31Q9Y3C7 131 aa7.31□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A087WV48 116 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A1W2PS29 197 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 FAM157AC9JC47 383 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 KCNAB3O43448 404 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 NARSO43776 548 aaKnown RBP7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 LILRB5O75023 590 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 INHAP05111 366 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 RHOP08100 348 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 AKR1C3P42330 323 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 GLP1RP43220 463 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 RAB5CP51148 216 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 EEF1A1P5Q5VTE0 462 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 FIGNL1Q6PIW4 674 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 BIVMQ86UB2 503 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 FGF13Q92913 245 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 MALSU1Q96EH3 234 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 MESP1Q9BRJ9 268 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF426Q9BUY5 554 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 TET1Q8NFU7 2136 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 TRBV6-7A0A0A0MS04 114 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 CENPVL1A0A0U1RR11 272 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 CXorf51AA0A1B0GTR3 108 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 AMY2AP04746 511 aa7.3□□□□□ -1.24
HMGXB4-202ENST00000418170 C8orf89P0DMQ9 161 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms