RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 RASSF1Q9NS23 344 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 IL20RAQ9UHF4 553 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 SIGLEC7Q9Y286 467 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 HRNRQ86YZ3 2850 aaPredicted RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 A0A096LPE4 126 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 A0A1W2PPZ6 126 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 FAM221AA4D161 298 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 NPIPB13A6NJU9 1138 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 NPIPB4C9JG80 1138 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 RPL36A-HNRNPH2H7BZ11 118 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 TRMUO75648 421 aaKnown RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 NDUFB2O95178 105 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 GOSR1O95249 250 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 ACADSP16219 412 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 LOXP28300 417 aaPredicted RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 HOXC12P31275 282 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 IFNGR2P38484 337 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 GSSP48637 474 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 HMGA2P52926 109 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 SH3BGRP55822 239 aaPredicted RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 CLRN1P58418 232 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 PRPS1P60891 318 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 RPL27P61353 136 aaKnown RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 ERVK-25P63136 954 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 ARF1P84077 181 aaKnown RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 MYBPC1Q00872 1141 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 OR7E24Q6IFN5 339 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 ZNF770Q6IQ21 691 aaPredicted RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 C1orf94Q6P1W5 598 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 KLHL24Q6TFL4 600 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 WDR31Q8NA23 367 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 ZNF519Q8TB69 540 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 HSD17B8Q92506 261 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 HDAC2Q92769 488 aaKnown RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 LRR1Q96L50 414 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 MUS81Q96NY9 551 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 USB1Q9BQ65 265 aaKnown RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 NDEL1Q9GZM8 345 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 TXNIPQ9H3M7 391 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 SLC17A5Q9NRA2 495 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 CCM2LQ9NUG4 571 aaPredicted RBP10.94□□□□□ -0.66
SKA1-203ENST00000417656 GLTPQ9NZD2 209 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 NPAP1Q9NZP6 1156 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 ADAM18Q9Y3Q7 739 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 SLC25A15Q9Y619 301 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 PRR14LQ5THK1 2151 aa10.94□□□□□ -0.66
SKA1-203ENST00000417656 ABCA12Q86UK0 2595 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 A0A1W2PPR1 153 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 ZNF99A8MXY4 864 aaPredicted RBP10.93□□□□□ -0.66
SKA1-203ENST00000417656 H7C1C5 153 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 GNGT2O14610 69 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 PTP4A3O75365 173 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 TIPRLO75663 272 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 CD14P08571 375 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 HOXB6P17509 224 aaKnown RBP10.93□□□□□ -0.66
SKA1-203ENST00000417656 ACVR1BP36896 505 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 LCN6P62502 163 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 TUBA1BP68363 451 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 TUBA4AP68366 448 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 FMODQ06828 376 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 CD47Q08722 323 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 TSPAN31Q12999 210 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 TAF11Q15544 211 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 MESTQ5EB52 335 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 BEX5Q5H9J7 111 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 ANKRD16Q6P6B7 361 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 SMARCD3Q6STE5 483 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 ZNF620Q6ZNG0 422 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 TUBA1AQ71U36 451 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 P2RY8Q86VZ1 359 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 CLDN22Q8N7P3 220 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 SYT14Q8NB59 555 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 AQP11Q8NBQ7 271 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 PAPD5Q8NDF8 572 aaKnown RBP10.93□□□□□ -0.66
SKA1-203ENST00000417656 OR10G2Q8NGC3 310 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 GNPDA2Q8TDQ7 276 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 BCL2L2Q92843 193 aaPredicted RBP10.93□□□□□ -0.66
SKA1-203ENST00000417656 MUCL1Q96DR8 90 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 PLPPR2Q96GM1 343 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 LURAP1Q96LR2 239 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 Q96M85 177 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 ZNF570Q96NI8 536 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 GPX7Q96SL4 187 aaPredicted RBP10.93□□□□□ -0.66
SKA1-203ENST00000417656 OR52D1Q9H346 318 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 YY1AP1Q9H869 796 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 STX18Q9P2W9 335 aaKnown RBP10.93□□□□□ -0.66
SKA1-203ENST00000417656 ZNF346Q9UL40 294 aaKnown RBP10.93□□□□□ -0.66
SKA1-203ENST00000417656 AMDHD2Q9Y303 409 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 CACNA1DQ01668 2161 aa10.93□□□□□ -0.66
SKA1-203ENST00000417656 ALPK2Q86TB3 2170 aa10.92□□□□□ -0.66
SKA1-203ENST00000417656 TEX13CA0A0J9YWL9 993 aa10.92□□□□□ -0.66
SKA1-203ENST00000417656 CENPBD1B2RD01 187 aa10.92□□□□□ -0.66
SKA1-203ENST00000417656 E2F6O75461 281 aa10.92□□□□□ -0.66
SKA1-203ENST00000417656 PPP1R3DO95685 299 aa10.92□□□□□ -0.66
SKA1-203ENST00000417656 QDPRP09417 244 aa10.92□□□□□ -0.66
SKA1-203ENST00000417656 B4GALT1P15291 398 aa10.92□□□□□ -0.66
SKA1-203ENST00000417656 ZNF83P51522 516 aa10.92□□□□□ -0.66
SKA1-203ENST00000417656 KRR1Q13601 381 aaKnown RBP10.92□□□□□ -0.66
SKA1-203ENST00000417656 MICAQ29983 383 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms