RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 AMDHD2Q9Y303 409 aa11.2□□□□□ -0.62
LINC00339-202ENST00000416769 HDGFL3Q9Y3E1 203 aa11.2□□□□□ -0.62
LINC00339-202ENST00000416769 PMF1-BGLAPU3KQ54 211 aa11.2□□□□□ -0.62
LINC00339-202ENST00000416769 A0A096LPE4 126 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 A0A1W2PPZ6 126 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 ZNF503-AS2A6NEH8 195 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 M0R3H8 397 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 OR4A8P0C604 315 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 RAP2AP10114 183 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 PRG2P13727 222 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 ZNF23P17027 643 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 TNFRSF1BP20333 461 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 MPGP29372 298 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 THBS2P35442 1172 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 SELENOPP49908 381 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 PRPS1P60891 318 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 OR1Q1Q15612 314 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 NPTX1Q15818 432 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 TBRG1Q3YBR2 411 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-202ENST00000416769 WBP2NLQ6ICG8 309 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 SSX8Q7RTT4 187 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 TSEN54Q7Z6J9 526 aaKnown RBP11.19□□□□□ -0.62
LINC00339-202ENST00000416769 RBM45Q8IUH3 476 aaKnown RBP11.19□□□□□ -0.62
LINC00339-202ENST00000416769 C1orf162Q8NEQ5 155 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-202ENST00000416769 ADAM19Q9H013 955 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 CA10Q9NS85 328 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 ENPP4Q9Y6X5 453 aa11.19□□□□□ -0.62
LINC00339-202ENST00000416769 LILRA1O75019 489 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 UPK3AO75631 287 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 RGS9O75916 674 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-202ENST00000416769 FABP3P05413 133 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 CECR9P0C854 216 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 RHCEP18577 417 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 IFNA8P32881 189 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 SERPINF1P36955 418 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 SLC1A3P43003 542 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 MAGEA2P43356 314 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 P2RY4P51582 365 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 SNRPD2P62316 118 aaKnown RBP11.18□□□□□ -0.62
LINC00339-202ENST00000416769 HOXC5Q00444 222 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 HGFACQ04756 655 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 OR7A5Q15622 319 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 MSMPQ1L6U9 139 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 ENTPD8Q5MY95 495 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 OTUD3Q5T2D3 398 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-202ENST00000416769 ZNF613Q6PF04 617 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 AAED1Q7RTV5 226 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 ZDHHC21Q8IVQ6 265 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 C17orf78Q8N4C9 275 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 OR9K2Q8NGE7 335 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 OR1K1Q8NGR3 316 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 RSRC1Q96IZ7 334 aaKnown RBP11.18□□□□□ -0.62
LINC00339-202ENST00000416769 SLC38A2Q96QD8 506 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 SNX18Q96RF0 628 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 ZNF347Q96SE7 839 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 CHID1Q9BWS9 393 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 PLA2G12AQ9BZM1 189 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 YY1AP1Q9H869 796 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 ARMC1Q9NVT9 282 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 NDUFAF4Q9P032 175 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 AURKCQ9UQB9 309 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 FAM32AQ9Y421 112 aaKnown RBP11.18□□□□□ -0.62
LINC00339-202ENST00000416769 SPIN1Q9Y657 262 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-202ENST00000416769 FKBP7Q9Y680 259 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 V9GYQ6 96 aa11.18□□□□□ -0.62
LINC00339-202ENST00000416769 LOC390937A0A1W2PQ73 354 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 LIPT2A6NK58 231 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 OR5F1O95221 314 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 HTR2AP28223 471 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 HTR3AP46098 478 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 SLC35A1P78382 337 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 NAAAQ02083 359 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 RUNX1T1Q06455 604 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 ZFP1Q6P2D0 407 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 ULK3Q6PHR2 472 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 DEF8Q6ZN54 512 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 GPAT4Q86UL3 456 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 CYP4Z1Q86W10 505 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 SVOPLQ8N434 492 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 ADAMTS16Q8TE57 1224 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 DNAJA4Q8WW22 397 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-202ENST00000416769 BCL2L2Q92843 193 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-202ENST00000416769 TMEM45BQ96B21 275 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 SLCO4A1Q96BD0 722 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 PLK3Q9H4B4 646 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 C12orf10Q9HB07 376 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 RPS6KB2Q9UBS0 482 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 SEC14L4Q9UDX3 406 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 A4GNTQ9UNA3 340 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 TRAPPC4Q9Y296 219 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 AP4S1Q9Y587 144 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 MGAM2Q2M2H8 2515 aa11.17□□□□□ -0.62
LINC00339-202ENST00000416769 A0A0B4J2E0 115 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 A0A1B0GWA3 101 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 A0A1B0GX12 115 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 SH3PXD2BA1X283 911 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 TRAPPC13A5PLN9 417 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 CPSF4LA6NMK7 179 aaKnown RBP11.16□□□□□ -0.62
LINC00339-202ENST00000416769 hCG_2039718K7EN88 272 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms