RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 PRTGQ2VWP7 1150 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 CDCP2Q5VXM1 449 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 OR4C11Q6IEV9 310 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 ARL9Q6T311 187 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 C6orf120Q7Z4R8 191 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 COMTD1Q86VU5 262 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 LDLRAD3Q86YD5 345 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 ARHGEF39Q8N4T4 335 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 OR2L5Q8NG80 312 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 OR6T1Q8NGN1 323 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 BBS10Q8TAM1 723 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 BRIX1Q8TDN6 353 aaKnown RBP12.06□□□□□ -0.48
HNF4A-204ENST00000415691 SMIM10Q96HG1 83 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 FXYD6Q9H0Q3 95 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 KLHL1Q9NR64 748 aa12.06□□□□□ -0.48
HNF4A-204ENST00000415691 PMS2P1A4D2B8 440 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 EFCAB7A8K855 629 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 MT-CO3P00414 261 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 IL3P08700 152 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 FTH1P19P0C7X4 201 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 NRG3P56975 720 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 STXBP1P61764 594 aaKnown RBP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 STX4Q12846 297 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 TRAM2Q15035 370 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 DEFB134Q4QY38 66 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 TMEM35AQ53FP2 167 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 ACSM3Q53FZ2 586 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 C10orf91Q5T1B1 145 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 CORO6Q6QEF8 472 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 APOOLQ6UXV4 268 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 NHLRC1Q6VVB1 395 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 PRSS45Q7RTY3 260 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 OVCH1Q7RTY7 1134 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 PUSL1Q8N0Z8 303 aaKnown RBP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 DNAAF1Q8NEP3 725 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 PIGXQ8TBF5 258 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 C15orf40Q8WUR7 153 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 PGLYRP3Q96LB9 341 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 PTDSS2Q9BVG9 487 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 MFFQ9GZY8 342 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 SIDT1Q9NXL6 827 aaKnown RBP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 PCDHGA1Q9Y5H4 931 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 A0A0D9SG52 128 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 TMEM218A2RU14 115 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 EIF3GO75821 320 aaKnown RBP eCLIP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 ARL6IP5O75915 188 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 SPDEFO95238 335 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 TIAF1O95411 115 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 CSRP1P21291 193 aaKnown RBP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 PPP2R1BP30154 601 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 MNDAP41218 407 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 SSTP61278 116 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 SERTAD2Q14140 314 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 CLEC12AQ5QGZ9 265 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 AVPI1Q5T686 147 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 DMKNQ6E0U4 476 aaPredicted RBP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 BBS1Q8NFJ9 593 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 OR51G2Q8NGK0 314 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 RAB8BQ92930 207 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 ZNF764Q96H86 408 aaPredicted RBP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 HINT3Q9NQE9 182 aaKnown RBP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 SERTAD3Q9UJW9 196 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 CARHSP1Q9Y2V2 147 aaKnown RBP12.05□□□□□ -0.48
HNF4A-204ENST00000415691 SPTBP11277 2137 aa12.05□□□□□ -0.48
HNF4A-204ENST00000415691 COL27A1Q8IZC6 1860 aaPredicted RBP12.04□□□□□ -0.48
HNF4A-204ENST00000415691 DAPL1A0PJW8 107 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 ZNF860A6NHJ4 632 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 RFPL4AA6NLU0 287 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 RFPL4AL1F8VTS6 287 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 KLF4O43474 513 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 SGCEO43556 437 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 TMPRSS11DO60235 418 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 EPPINO95925 133 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 GLAP06280 429 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 S100A9P06702 114 aaKnown RBP12.04□□□□□ -0.48
HNF4A-204ENST00000415691 SPI1P17947 270 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 AGTR1P30556 359 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 FRKP42685 505 aaPredicted RBP12.04□□□□□ -0.48
HNF4A-204ENST00000415691 SSR2P43308 183 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 H2BFSP57053 126 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 TRA2AQ13595 282 aaKnown RBP eCLIP12.04□□□□□ -0.488e-7■■■■■ 29.7
HNF4A-204ENST00000415691 ISXQ2M1V0 245 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 LINC00303Q3SY05 128 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 HES3Q5TGS1 186 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 LIN54Q6MZP7 749 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 LINGO2Q7L985 606 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 METTL27Q8N6F8 245 aaPredicted RBP12.04□□□□□ -0.48
HNF4A-204ENST00000415691 ACOT4Q8N9L9 421 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 OR2T33Q8NG76 320 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 OR52I2Q8NH67 350 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 ENKD1Q9H0I2 346 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 AHSPQ9NZD4 102 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 FITM1A5D6W6 292 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 SYT5O00445 386 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 SOCS6O14544 535 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 FOXS1O43638 330 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 DKK1O94907 266 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 IGF2P01344 180 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 FOLR2P14207 255 aa12.04□□□□□ -0.48
HNF4A-204ENST00000415691 ANXA7P20073 488 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms