RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ZFAND4Q86XD8 727 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TCTE3Q8IZS6 198 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCDC185Q8N715 623 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 GPRC5AQ8NFJ5 357 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR4A15Q8NGL6 344 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR6F1Q8NGZ6 308 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MCFD2Q8NI22 146 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ITFG1Q8TB96 612 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 STAG3L4Q8TBR4 150 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 FANK1Q8TC84 345 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 LRRC20Q8TCA0 184 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 GPX8Q8TED1 209 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZFP90Q8TF47 636 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CAPSLQ8WWF8 208 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ING5Q8WYH8 240 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 RPL3LQ92901 407 aaKnown RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MYDGFQ969H8 173 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZHX1-C8orf76Q96EF9 292 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 POM121L2Q96KW2 1035 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 SENP8Q96LD8 212 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CEP19Q96LK0 163 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CCNL2Q96S94 520 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 LGMNQ99538 433 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 IL12RB2Q99665 862 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 PITX2Q99697 317 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 OMDQ99983 421 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM43Q9BTV4 400 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 FICDQ9BVA6 458 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR2AG1Q9H205 316 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 GAL3ST2Q9H3Q3 398 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MFSD1Q9H3U5 465 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 RIMS4Q9H426 269 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM231Q9H6L2 316 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 NIPAL2Q9H841 368 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CAB39LQ9H9S4 337 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 APMAPQ9HDC9 416 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACKR4Q9NPB9 350 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF71Q9NQZ8 489 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 HEBP1Q9NRV9 189 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM49BQ9NUQ9 324 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MS4A12Q9NXJ0 267 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 GTSE1Q9NYZ3 720 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 IL17BQ9UHF5 180 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 ENOPH1Q9UHY7 261 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 KLHL21Q9UJP4 597 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 STOML2Q9UJZ1 356 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 NUP50Q9UKX7 468 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 CDH9Q9ULB4 789 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 BTRCQ9Y297 605 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 POFUT2Q9Y2G5 429 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 MRPS28Q9Y2Q9 187 aaKnown RBP3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 DNAJC15Q9Y5T4 150 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 PARP14Q460N5 1801 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 COL1A2P08123 1366 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 SMCHD1A6NHR9 2005 aa3.2□□□□□ -1.9
HMGB3P23-201ENST00000414981 BTAF1O14981 1849 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 NOTCH3Q9UM47 2321 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 A0A1B0GUH1 482 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM240BA0A1B0GVZ2 78 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 FEZF1A0PJY2 475 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 MBLAC1A4D2B0 266 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 WASH3PC4AMC7 463 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PTGESO14684 152 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PRMT5O14744 637 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 BCKDKO14874 412 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 COCHO43405 550 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 KDELR3O43731 214 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 SSX4O60224 188 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 MPZL2O60487 215 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 WBP4O75554 376 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 DFFBO76075 338 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR4F21O95013 312 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ANGPTL1O95841 491 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 TBX6O95947 436 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CST1P01037 141 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 NGFP01138 241 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 EPOP01588 193 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 IL6P05231 212 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 RPLP0P05388 317 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 HTR1AP08908 422 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ANKRD34CP0C6C1 535 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PNMTP11086 282 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 GOT1P17174 413 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 OGNP20774 298 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CYP3A5P20815 502 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CXCR2P25025 360 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 HLA-DMAP28067 261 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PSMB6P28072 239 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ELK4P28324 431 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PDHA2P29803 388 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 SHMT2P34897 504 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 NAA10P41227 235 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CDC34P49427 236 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 RGS7P49802 495 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 POLR2JP52435 117 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 IST1P53990 364 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CDH11P55287 796 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 TAS2R39P59534 338 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CRADDP78560 199 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms