RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PPIL3Q9H2H8 161 aaKnown RBP3.59□□□□□ -1.83
LINC01048-201ENST00000414480 TMEM38AQ9H6F2 299 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 WDCPQ9H6R7 721 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 ESRP2Q9H6T0 727 aaKnown RBP3.59□□□□□ -1.83
LINC01048-201ENST00000414480 LDAHQ9H6V9 325 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 NMNAT1Q9HAN9 279 aaPredicted RBP3.59□□□□□ -1.83
LINC01048-201ENST00000414480 POPDC2Q9HBU9 364 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 CPNE5Q9HCH3 593 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 GP6Q9HCN6 339 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 SPAG4Q9NPE6 437 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 HEBP1Q9NRV9 189 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 SLC22A11Q9NSA0 550 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.59□□□□□ -1.83
LINC01048-201ENST00000414480 C14orf105Q9NVL8 296 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 NECAP2Q9NVZ3 263 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 TAS2R14Q9NYV8 317 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 MED11Q9P086 117 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 SMPXQ9UHP9 88 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 ZNF490Q9ULM2 529 aaPredicted RBP3.59□□□□□ -1.83
LINC01048-201ENST00000414480 MRPS18CQ9Y3D5 142 aaKnown RBP3.59□□□□□ -1.83
LINC01048-201ENST00000414480 CDH10Q9Y6N8 788 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 TMEM56-RWDD3S4R434 201 aa3.59□□□□□ -1.83
LINC01048-201ENST00000414480 PLXNB3Q9ULL4 1909 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 COL12A1Q99715 3063 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 LOC105369274A0A096LPK9 316 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 LOC102723532A0A0G2JNH3 316 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 SPAARA0A1B0GVQ0 90 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 A0A1B0GW55 424 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 A0A1W2PQ27 194 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 A0A1W2PQ64 194 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 A0A1W2PQC6 194 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 A0A1W2PQD8 194 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 MEIOCA2RUB1 952 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 MBD3L4A6NDZ8 208 aaPredicted RBP3.58□□□□□ -1.84
LINC01048-201ENST00000414480 MBD3L3A6NE82 208 aaPredicted RBP3.58□□□□□ -1.84
LINC01048-201ENST00000414480 WIPF3A6NGB9 483 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 C1orf196B1AJZ1 125 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 F5H5T6 163 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 K7EP13 123 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 K7ERU9 68 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 M0R143 59 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CLIC1O00299 241 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 IMPA2O14732 288 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 NRP1O14786 923 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 SLC16A5O15375 505 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 AIREO43918 545 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 PAGE4O60829 102 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 ZNF623O75123 536 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 RP2O75695 350 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 SCGNO76038 276 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 GLSO94925 669 aaPredicted RBP3.58□□□□□ -1.84
LINC01048-201ENST00000414480 NKX2-2O95096 273 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CPNE6O95741 557 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 BMP15O95972 392 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 IGSF6O95976 241 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 ACTL6AO96019 429 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 OAS1P00973 400 aaKnown RBP3.58□□□□□ -1.84
LINC01048-201ENST00000414480 MT-ND4P03905 459 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 THBDP07204 575 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 DUX4L2P0CJ85 424 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 DUX4L3P0CJ86 424 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 DUX4L4P0CJ87 422 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 DUX4L5P0CJ88 424 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 DUX4L6P0CJ89 424 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 DUX4L7P0CJ90 424 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 SNHG28P0DPA3 235 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 RAB3BP20337 219 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 MALP21145 153 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 SLC2A5P22732 501 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 IVDP26440 423 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 PSMB4P28070 264 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 HTR2AP28223 471 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 S100A2P29034 98 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CASP1P29466 404 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 NTSR1P30989 418 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 SLC6A4P31645 630 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 S100A11P31949 105 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 GKP32189 559 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 GJA4P35212 333 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 SSTR5P35346 364 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CFHR2P36980 270 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 LIPAP38571 399 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CSNK1A1P48729 337 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 HLCSP50747 726 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 PPT1P50897 306 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 RAB5CP51148 216 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 NR0B1P51843 470 aaKnown RBP3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CHN2P52757 468 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 KLF3P57682 345 aaPredicted RBP3.58□□□□□ -1.84
LINC01048-201ENST00000414480 DNAJB13P59910 316 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CDC42P60953 191 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CKS1BP61024 79 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 RHOAP61586 193 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 CD300CQ08708 224 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 ACSM2AQ08AH3 577 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 ABHD18Q0P651 414 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 MGAT2Q10469 447 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 ELAVL3Q14576 367 aaKnown RBP3.58□□□□□ -1.84
LINC01048-201ENST00000414480 OXA1LQ15070 435 aa3.58□□□□□ -1.84
LINC01048-201ENST00000414480 RPE65Q16518 533 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms