RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 C19orf67A6NJJ6 358 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 NTSR2O95665 410 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 LIPFP07098 398 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 HTR1EP28566 365 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SSTR4P31391 388 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SFTPDP35247 375 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF133P52736 654 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 GPLD1P80108 840 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 HERPUD1Q15011 391 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 EOGTQ5NDL2 527 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 RBM23Q86U06 439 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 PLD6Q8N2A8 252 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR6M1Q8NGM8 313 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 LYSMD1Q96S90 227 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ELOVL1Q9BW60 279 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 DDX31Q9H8H2 851 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF160Q9HCG1 818 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OSER1Q9NX31 292 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 NDRG3Q9UGV2 375 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TUBE1Q9UJT0 475 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 NFS1Q9Y697 457 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 MAGI3Q5TCQ9 1506 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 LOC100130705A0A1B0GUX0 176 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 H7C1C5 153 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF195O14628 629 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 POU3F3P20264 500 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ZP3P21754 424 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OTX2P32243 289 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 BAK1Q16611 211 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 CT83Q5H943 113 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 NT5DC1Q5TFE4 455 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR2T5Q6IEZ7 315 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 LRFN4Q6PJG9 635 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM126BQ8IUX1 230 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 GPR32P1Q8NGA4 272 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR2T29Q8NH02 315 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM176AQ96HP8 235 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SLC45A3Q96JT2 553 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SLC30A3Q99726 388 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 MXRA8Q9BRK3 442 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 HMX1Q9NP08 348 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ITM2CQ9NQX7 267 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 GPR173Q9NS66 373 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 RIMS3Q9UJD0 308 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 WIPI2Q9Y4P8 454 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ADCY10Q96PN6 1610 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 PTPN23Q9H3S7 1636 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 LCATP04180 440 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 HNRNPA1P09651 372 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SRGNP10124 158 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 HNRNPH3P31942 346 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 XCR1P46094 333 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 DIO3P55073 304 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 RHBDL3P58872 404 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 C18orf21Q32NC0 220 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 HNRNPA1L2Q32P51 320 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SLC25A52Q3SY17 297 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 WDR25Q64LD2 544 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OSTM1Q86WC4 334 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR5A1Q8NGJ0 315 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 UBE2FQ969M7 185 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SFXN2Q96NB2 322 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 FBXO8Q9NRD0 319 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TAS2R14Q9NYV8 317 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ARHGEF12Q9NZN5 1544 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SYNJ2O15056 1496 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 AQP7P3A6NL99 342 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ISLRO14498 428 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR7C2O60412 319 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SLC43A1O75387 559 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OAS1P00973 400 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 PRF1P14222 555 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 CBR1P16152 277 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SLC19A1P41440 591 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 GSK3BP49841 420 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 CLDN18P56856 261 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TNFAIP6P98066 277 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 FPGSQ05932 587 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 PDZK1IP1Q13113 114 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 FAM43BQ6ZT52 329 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 MRPL55Q7Z7F7 128 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SLC47A2Q86VL8 602 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 NPAS3Q8IXF0 933 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR2C3Q8N628 320 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 AQP11Q8NBQ7 271 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 PTPN18Q99952 460 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TMPRSS13Q9BYE2 586 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SMG9Q9H0W8 520 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 RASL12Q9NYN1 266 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 UFC1Q9Y3C8 167 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR51B4Q9Y5P0 310 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 BTNL10A8MVZ5 291 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PGA4P0DJD7 388 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PGA3P0DJD8 388 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PGA5P0DJD9 388 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CKMT1AP12532 417 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FBLP22087 321 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PTGFRP43088 359 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SOX2P48431 317 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms