RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ALFQ53S48 1182 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 CDKL4Q5MAI5 379 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 GRTP1Q5TC63 336 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ANKRD45Q5TZF3 282 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 LIPNQ5VXI9 398 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 GLT8D1Q68CQ7 371 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 DUS1LQ6P1R4 473 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 FAM131AQ6UXB0 335 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 HSDL2Q6YN16 418 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 Q6ZQY7 126 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRIM74Q86UV6 250 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRIM73Q86UV7 250 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 COMTD1Q86VU5 262 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 PAQR7Q86WK9 346 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 CEP57Q86XR8 500 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 STK40Q8N2I9 435 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 PPM1KQ8N3J5 372 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 RYBPQ8N488 228 aaPredicted RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 PTGR2Q8N8N7 351 aaPredicted RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC26A10Q8NG04 563 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR4K5Q8NGD3 323 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR9Q2Q8NGE9 314 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR13C3Q8NGS6 347 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPLP0P6Q8NHW5 317 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 NCOA7Q8NI08 942 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ACMSDQ8TDX5 336 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SCFD2Q8WU76 684 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SEPT1Q8WYJ6 367 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ERGIC1Q969X5 290 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ECHDC3Q96DC8 303 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 C4orf36Q96KX1 117 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 TIGD1Q96MW7 591 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 HBEGFQ99075 208 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 TEAD3Q99594 435 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 CCT7Q99832 543 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 POLR2J2Q9GZM3 115 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 POLR2J3Q9H1A7 115 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 PDCL3Q9H2J4 239 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 GHITMQ9H3K2 345 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 UNC45AQ9H3U1 944 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 C1orf198Q9H425 327 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SMARCAD1Q9H4L7 1026 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 SFXN1Q9H9B4 322 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 HEYLQ9NQ87 328 aaPredicted RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 CCL28Q9NRJ3 127 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 CYSLTR2Q9NS75 346 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 DDX19AQ9NUU7 478 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 FKBP14Q9NWM8 211 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 C21orf62Q9NYP8 219 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 XPR1Q9UBH6 696 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 NARFQ9UHQ1 456 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRMT6Q9UJA5 497 aaKnown RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 CORO1CQ9ULV4 474 aaPredicted RBP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 NPIPA1Q9UND3 350 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 NIP7Q9Y221 180 aaKnown RBP eCLIP-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 EXOC6BQ9Y2D4 811 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 COQ4Q9Y3A0 265 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 RNF11Q9Y3C5 154 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 TRPV2Q9Y5S1 764 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ALG6Q9Y672 507 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 UBR2Q8IWV8 1755 aa-2.11□□□□□ -2.75
RNU4-88P-201ENST00000411220 ZNF142P52746 1687 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 ZNF236Q9UL36 1845 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 MYO3BQ8WXR4 1341 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 IGHV7-81A0A0B4J1V7 117 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 LOC102723971A0A1B0GUV8 181 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TCRBV7S3A2A0A539 114 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PLAC8L1A1L4L8 177 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 TMEM247A6NEH6 219 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 NCBP2LA6PVI3 153 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 ZNF736B4DX44 427 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 CACNB4O00305 520 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC17A2O00624 439 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 FBP2O00757 339 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 DYNC1I1O14576 645 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PGRMC2O15173 223 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC16A4O15374 487 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PRAMEF11O60813 436 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 CDC45O75419 566 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 KATNA1O75449 491 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 AKR7A3O95154 331 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 OLFM2O95897 454 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 ASLP04424 464 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 GRPP07492 148 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 FCGR3AP08637 254 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 UBTFL1P0CB47 393 aaPredicted RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 HSPA8P11142 646 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 G6PDP11413 515 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 HSD17B1P14061 328 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 CD36P16671 472 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 ACP1P24666 158 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PTPN4P29074 926 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 PPP2R1BP30154 601 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 MAGEA5P43359 124 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPL28P46779 137 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPL14P50914 215 aaKnown RBP-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 ARHGDIBP52566 201 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 RAD23BP54727 409 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 CCNA1P78396 465 aa-2.12□□□□□ -2.75
RNU4-88P-201ENST00000411220 SRYQ05066 204 aa-2.12□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms