RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ZNF264O43296 627 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TRIAP1O43715 76 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RAD1O60671 282 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PRAMEF2O60811 474 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 STK17BO94768 372 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 WISP3O95389 354 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MBPP02686 304 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 STATHP02808 62 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ACAA1P09110 424 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MPC1LP0DKB6 136 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 CBSLP0DN79 551 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 NR2F6P10588 404 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ERGP11308 486 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 APEHP13798 732 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 WT1P19544 449 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 CD22P20273 847 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 CD1BP29016 333 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SPRP35270 261 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RORAP35398 523 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 CBSP35520 551 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 CEACAM6P40199 344 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RGS4P49798 205 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ASCL1P50553 236 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PLA2G16P53816 162 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ATP12AP54707 1039 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ERVPABLB-1P60509 514 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ABCE1P61221 599 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TBPL1P62380 186 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ADARB1P78563 741 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MERTKQ12866 999 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 NAE1Q13564 534 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 KIR2DS3Q14952 304 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PON3Q15166 354 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 OR4D1Q15615 310 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TSNQ15631 228 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PPP1R3AQ16821 1122 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PNLIPRP3Q17RR3 467 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 C18orf21Q32NC0 220 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ANKRD55Q3KP44 614 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 CD300EQ496F6 205 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SGO1Q5FBB7 561 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PAGE2BQ5JRK9 111 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 DCAF12Q5T6F0 453 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 FAM69BQ5VUD6 431 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 FBXO42Q6P3S6 717 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 DEGS2Q6QHC5 323 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TEX261Q6UWH6 196 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SBSNQ6UWP8 590 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TIPARPQ7Z3E1 657 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MDGA2Q7Z553 956 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 NRARPQ7Z6K4 114 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ADGRE4PQ86SQ3 457 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RAB43Q86YS6 212 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PLD3Q8IV08 490 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 DEFB107AQ8IZN7 70 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RDH10Q8IZV5 341 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF808Q8N4W9 903 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 GDPD1Q8N9F7 314 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 BOLLQ8N9W6 283 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 KBTBD8Q8NFY9 601 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 OR2L3Q8NG85 312 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 OR4A16Q8NH70 328 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 OR1L3Q8NH93 324 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PYCR2Q96C36 320 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RHBDF1Q96CC6 855 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MED8Q96G25 268 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 HYLS1Q96M11 299 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SORCS2Q96PQ0 1159 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TEFMQ96QE5 360 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF300Q96RE9 604 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 GPR22Q99680 433 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TCEAL7Q9BRU2 100 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 C2orf88Q9BSF0 95 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MED18Q9BUE0 208 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 DUSP26Q9BV47 211 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 IFT27Q9BW83 186 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 FUNDC2Q9BWH2 189 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RAB11FIP5Q9BXF6 653 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ULBP3Q9BZM4 244 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 UCK2Q9BZX2 261 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 PIGUQ9H490 435 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MED20Q9H944 212 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 WDR76Q9H967 626 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 MYOZ1Q9NP98 299 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 FGF21Q9NSA1 209 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 STARD5Q9NSY2 213 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 NUDT15Q9NV35 164 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 LYARQ9NX58 379 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 THUMPD1Q9NXG2 353 aaKnown RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RDH8Q9NYR8 311 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TAS2R9Q9NYW1 312 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TREM2Q9NZC2 230 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 WWOXQ9NZC7 414 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SEMA5BQ9P283 1151 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 STOX2Q9P2F5 926 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SLC17A7Q9P2U7 560 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF639Q9UID6 485 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 RARRES3Q9UL19 164 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms