RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FAM109AQ8N4B1 249 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 RFLNBQ8N5W9 214 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ACBD7Q8N6N7 88 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 EXD3Q8N9H8 876 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ADPRHL1Q8NDY3 354 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 OR2V1Q8NHB1 315 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ROBO4Q8WZ75 1007 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF845Q96IR2 970 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 OXGR1Q96P68 337 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 CNN2Q99439 309 aaKnown RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 MGLLQ99685 303 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 NAA11Q9BSU3 229 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 LSM2Q9Y333 95 aaKnown RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 LAMA5O15230 3695 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 TRAV17A0A0B4J275 112 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 A0A1W2PQL4 384 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 J3QRE1 110 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 RRP8O43159 456 aaKnown RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 EIF1BO60739 113 aaKnown RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 TRMUO75648 421 aaKnown RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 IGHA1P01876 353 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 HLA-DQA2P01906 255 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 CTLA4P16410 223 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 H3F3AP84243 136 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 TMED1Q13445 227 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 C3AR1Q16581 482 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 TSTQ16762 297 aaKnown RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 SLC35D3Q5M8T2 416 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 LINC01590Q5TEZ4 76 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 PLXDC2Q6UX71 529 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ERI1Q8IV48 349 aaKnown RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ZADH2Q8N4Q0 377 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF775Q96BV0 537 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ZHX1-C8orf76Q96EF9 292 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 COG8Q96MW5 612 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ALG8Q9BVK2 526 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 HAO2Q9NYQ3 351 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 APC2O95996 2303 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 FRYQ5TBA9 3013 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 SLC35F4A4IF30 521 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 A6NIZ1 184 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 NPIPA2E9PIF3 369 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 NPIPA3F8WFD2 350 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 K7EM74 188 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 TFECO14948 347 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 SMAD9O15198 467 aaKnown RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 TRAF3IP2O43734 574 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 NOL3O60936 208 aaKnown RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 FZD7O75084 574 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 TFP02787 698 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 PDGFAP04085 211 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 CD36P16671 472 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 ID4P47928 161 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 LHX2P50458 406 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 WNT4P56705 351 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 CLDN17P56750 224 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 RAC3P60763 192 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 RAP1BP61224 184 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 LSM3P62310 102 aaKnown RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 RAP1AP62834 184 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 POU4F2Q12837 409 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 HYAL4Q2M3T9 481 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 SLC35F2Q8IXU6 374 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 SPRYD4Q8WW59 207 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 NSMAFQ92636 917 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 ABTB1Q969K4 478 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 ISG20L2Q9H9L3 353 aaKnown RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 FANCFQ9NPI8 374 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 VSX1Q9NZR4 365 aaPredicted RBP11.11□□□□□ -0.63
CHMP3-204ENST00000409727 B9D1Q9UPM9 204 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 RASD1Q9Y272 281 aa11.11□□□□□ -0.63
CHMP3-204ENST00000409727 LINC01387J3KSC0 135 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 MAGEB4O15481 346 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF24P17028 368 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 RPS27P42677 84 aaKnown RBP11.1□□□□□ -0.63
CHMP3-204ENST00000409727 CLDN18P56856 261 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 CLRN1P58418 232 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 GGTLC2Q14390 218 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 RNLSQ5VYX0 342 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 VASNQ6EMK4 673 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 SSX6Q7RTT6 188 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 KLHL36Q8N4N3 616 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 ZFP41Q8N8Y5 198 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 POMGNT2Q8NAT1 580 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 TM9SF4Q92544 642 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 C12orf43Q96C57 262 aaKnown RBP11.1□□□□□ -0.63
CHMP3-204ENST00000409727 YIPF6Q96EC8 236 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 ADGRG7Q96K78 797 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 OPALINQ96PE5 141 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 KCNK17Q96T54 332 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF649Q9BS31 505 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 WDR76Q9H967 626 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 MOKQ9UQ07 419 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 RAXQ9Y2V3 346 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 TRGV5A0A0B4J1U4 118 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 IGKV1D-43A0A0B4J1Z2 117 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 TMEM129A0AVI4 362 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF726A6NNF4 738 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 H3BMQ9 156 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms