RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 BPIFB3P59826 476 aa11.27□□□□□ -0.6
SHANK2-203ENST00000409161 GTDC1Q4AE62 458 aa11.27□□□□□ -0.6
SHANK2-203ENST00000409161 PDLIM5Q96HC4 596 aaKnown RBP11.27□□□□□ -0.6
SHANK2-203ENST00000409161 SPTBN1Q01082 2364 aaKnown RBP11.27□□□□□ -0.6
SHANK2-203ENST00000409161 CHD3Q12873 2000 aaKnown RBP11.27□□□□□ -0.6
SHANK2-203ENST00000409161 CBY3A6NI87 242 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 ZFAND5O76080 213 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 GM2AP17900 193 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 MAOBP27338 520 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 SLC5A2P31639 672 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 ARG2P78540 354 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 MRPL2Q5T653 305 aaKnown RBP11.27□□□□□ -0.61
SHANK2-203ENST00000409161 SPRED1Q7Z699 444 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 EIF1BO60739 113 aaKnown RBP11.27□□□□□ -0.61
SHANK2-203ENST00000409161 HMGN2P05204 90 aaKnown RBP11.27□□□□□ -0.61
SHANK2-203ENST00000409161 POU3F1Q03052 451 aaPredicted RBP11.27□□□□□ -0.61
SHANK2-203ENST00000409161 SLC10A2Q12908 348 aaPredicted RBP11.27□□□□□ -0.61
SHANK2-203ENST00000409161 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.27□□□□□ -0.61
SHANK2-203ENST00000409161 ULBP2Q9BZM5 246 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 DOT1LQ8TEK3 1739 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 YY2O15391 372 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 LIPCP11150 499 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 FAM3DQ96BQ1 224 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 FBXO8Q9NRD0 319 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 MAKP20794 623 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 ZNF85Q03923 595 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 ABHD4Q8TB40 342 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 GHSRQ92847 366 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 NEIL2Q969S2 332 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 C12orf57Q99622 126 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 MRPS28Q9Y2Q9 187 aaKnown RBP11.27□□□□□ -0.61
SHANK2-203ENST00000409161 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.27□□□□□ -0.61
SHANK2-203ENST00000409161 NKX6-3A6NJ46 265 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 TM4SF1P30408 202 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 LRRC26Q2I0M4 334 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 MOB3CQ70IA8 216 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 DPPA4Q7L190 304 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 H2BFWTQ7Z2G1 175 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 LYSMD2Q8IV50 215 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 CABLES2Q9BTV7 478 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 TPPP3Q9BW30 176 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 A4GALTQ9NPC4 353 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 URGCP-MRPS24S4R325 110 aa11.27□□□□□ -0.61
SHANK2-203ENST00000409161 MMP7P09237 267 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 SLC35A2P78381 396 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 OR7E24Q6IFN5 339 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 IGSF8Q969P0 613 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 OSGIN2Q9Y236 505 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 FAM72CH0Y354 149 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 PDGFBP01127 241 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 ENPP1P22413 925 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 COTL1Q14019 142 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 MBTPS1Q14703 1052 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 FAM72AQ5TYM5 149 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 PM20D1Q6GTS8 502 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 FAM72DQ6L9T8 149 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 FAM72BQ86X60 149 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 SLC24A4Q8NFF2 622 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 DNAJA3Q96EY1 480 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 LIN7CQ9NUP9 197 aaKnown RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 SEMA4FO95754 770 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 FCGR2AP12318 317 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 RAB7AP51149 207 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 SQSTM1Q13501 440 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 TESK1Q15569 626 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 COMMD1Q8N668 190 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 BPIFCQ8NFQ6 507 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 ANGPTL6Q8NI99 470 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 ZCWPW2A0A1B0GU75 182 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 HEXAP06865 529 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 ARSDP51689 593 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 AGBL4Q5VU57 503 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 IL20RBQ6UXL0 311 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 PTRH1Q86Y79 214 aaKnown RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 ADGRF3Q8IZF5 1079 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 SLC38A6Q8IZM9 456 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 UCN3Q969E3 161 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 NEURL3Q96EH8 262 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 C11orf54Q9H0W9 315 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 PRAMEF26H0Y7S4 382 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 CTDSP2O14595 271 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 PRAMEF4O60810 478 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 CLEC3BP05452 202 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 SIM1P81133 766 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 ACOT6Q3I5F7 207 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 ZNF836Q6ZNA1 936 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 CPEB3Q8NE35 698 aaKnown RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 GALNT9Q9HCQ5 603 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 AK3Q9UIJ7 227 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 TRABD2BA6NFA1 517 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 ZNF593O00488 134 aaPredicted RBP11.26□□□□□ -0.61
SHANK2-203ENST00000409161 C1orf105O95561 183 aa11.26□□□□□ -0.61
SHANK2-203ENST00000409161 MT-ATP6P00846 226 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms