RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 PCBP4P57723 403 aaKnown RBP10.97□□□□□ -0.65
HMGB1-206ENST00000405805 ST3GAL2Q16842 350 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 HEPHL1Q6MZM0 1159 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 TMEM91Q6ZNR0 172 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 UBE3DQ7Z6J8 389 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 CD163Q86VB7 1156 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 IL17RCQ8NAC3 791 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 OR56B4Q8NH76 319 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 RNF170Q96K19 258 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 DGAT2Q96PD7 388 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 PTTG3PQ9NZH4 202 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 TBC1D29Q9UFV1 150 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 V9GY05 133 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 WDR87Q6ZQQ6 2873 aa10.97□□□□□ -0.65
HMGB1-206ENST00000405805 A0A087X0M5 115 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 A0A1B0GX30 115 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ST8SIA5O15466 376 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 OPN1LWP04000 364 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 HNF1AP20823 631 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 IDH3GP51553 393 aaPredicted RBP10.96□□□□□ -0.65
HMGB1-206ENST00000405805 DLX5P56178 289 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 RAP2BP61225 183 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ACTA2P62736 377 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ACTG2P63267 376 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ACTC1P68032 377 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ACTA1P68133 377 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ETFDHQ16134 617 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ACTBL2Q562R1 376 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 DMRTC1Q5HYR2 192 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 DPY19L4Q7Z388 723 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 CMTM4Q8IZR5 234 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 OR4N2Q8NGD1 307 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 PTP4A1Q93096 173 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 KIAA1143Q96AT1 154 aaPredicted RBP10.96□□□□□ -0.65
HMGB1-206ENST00000405805 PARP12Q9H0J9 701 aaKnown RBP10.96□□□□□ -0.65
HMGB1-206ENST00000405805 SYT4Q9H2B2 425 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 C8orf33Q9H7E9 229 aaPredicted RBP10.96□□□□□ -0.65
HMGB1-206ENST00000405805 CLDND1Q9NY35 253 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 OTOL1A6NHN0 477 aaPredicted RBP10.96□□□□□ -0.65
HMGB1-206ENST00000405805 UBL3O95164 117 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 SCGB1D1O95968 90 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 HPXP02790 462 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 RPS21P63220 83 aaKnown RBP10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ITPRIPL2Q3MIP1 535 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 ZNF776Q68DI1 518 aaPredicted RBP10.96□□□□□ -0.65
HMGB1-206ENST00000405805 TMUB2Q71RG4 321 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 LRRTM1Q86UE6 522 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 KDM8Q8N371 416 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 UBAC2Q8NBM4 344 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 OR51D1Q8NGF3 324 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 OR1J4Q8NGS1 313 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 METTL21AQ8WXB1 218 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 DIO2Q92813 273 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 BSCL2Q96G97 398 aaPredicted RBP10.96□□□□□ -0.65
HMGB1-206ENST00000405805 SLC6A7Q99884 636 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 EVA1AQ9H8M9 152 aa10.96□□□□□ -0.65
HMGB1-206ENST00000405805 H0YGG7 62 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 GPR171O14626 319 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 TGOLN2O43493 480 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 C4orf17Q53FE4 359 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 ZNF561Q8N587 486 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 OR5AK2Q8NH90 309 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 TOE1Q96GM8 510 aaKnown RBP10.96□□□□□ -0.66
HMGB1-206ENST00000405805 GPER1Q99527 375 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 MARVELD1Q9BSK0 173 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 APOOQ9BUR5 198 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 PPP1R3EQ9H7J1 279 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 VSX1Q9NZR4 365 aaPredicted RBP10.96□□□□□ -0.66
HMGB1-206ENST00000405805 TESQ9UGI8 421 aaKnown RBP10.96□□□□□ -0.66
HMGB1-206ENST00000405805 VWA8A3KMH1 1905 aa10.96□□□□□ -0.66
HMGB1-206ENST00000405805 SOX1O00570 391 aaPredicted RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 DNAJB6O75190 326 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 TSPAN15O95858 294 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 AMY2AP04746 511 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 LPLP06858 475 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 CXCR1P25024 350 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 TMEM201Q5SNT2 666 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 MRPL41Q8IXM3 137 aaKnown RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 CDRT4Q8N9R6 151 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 OR11H7Q8NGC8 314 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 FAM174AQ8TBP5 190 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 NPRL2Q8WTW4 380 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 SULT4A1Q9BR01 284 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ZNF275Q9NSD4 429 aaPredicted RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 FGF17O60258 216 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 CRYBA1P05813 215 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 DCNP07585 359 aaKnown RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 AGTR1P30556 359 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 GJA4P35212 333 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 EIF5AP63241 154 aaKnown RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 SGCAQ16586 387 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 TMEM240Q5SV17 173 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 FAM109BQ6ICB4 259 aaPredicted RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 FBXO46Q6PJ61 603 aaPredicted RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 ZNF227Q86WZ6 799 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 CDH26Q8IXH8 852 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 BRIX1Q8TDN6 353 aaKnown RBP10.95□□□□□ -0.66
HMGB1-206ENST00000405805 TMEM106AQ96A25 262 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 SLAMF9Q96A28 289 aa10.95□□□□□ -0.66
HMGB1-206ENST00000405805 CST11Q9H112 138 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms