RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 M6PRP20645 277 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 CLDN20P56880 219 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 SEC22CQ9BRL7 303 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 PDFQ9HBH1 243 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 LYRM4Q9HD34 91 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 AGAP14A8MT82 685 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 HMGN4O00479 90 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 TNFRSF4P43489 277 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 IHHQ14623 411 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 HIST2H3PS2Q5TEC6 136 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
SNED1-205ENST00000405547 OR2L13Q8N349 312 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 SLC16A11Q8NCK7 471 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 LFNGQ8NES3 379 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 FAM213BQ8TBF2 198 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 GCDHQ92947 438 aaPredicted RBP12.32□□□□□ -0.44
SNED1-205ENST00000405547 PDCD1LG2Q9BQ51 273 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 PIP5K1CO60331 668 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 OR2F2O95006 317 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 F11P03951 625 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 ARRB2P32121 409 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 SLC6A12P48065 614 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 EEF1A1P68104 462 aaKnown RBP12.32□□□□□ -0.44
SNED1-205ENST00000405547 OR2F1Q13607 317 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 AFMIDQ63HM1 303 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 TAAR8Q969N4 342 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 SAMD10Q9BYL1 202 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 MCTS1Q9ULC4 181 aaKnown RBP12.32□□□□□ -0.44
SNED1-205ENST00000405547 A0A0A6YYJ9 748 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 ZNF836Q6ZNA1 936 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 WDR5BQ86VZ2 330 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 PLPP5Q8NEB5 264 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 DCLRE1CQ96SD1 692 aaKnown RBP12.32□□□□□ -0.44
SNED1-205ENST00000405547 GPATCH2Q9NW75 528 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 APC2O95996 2303 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 SLC19A1P41440 591 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 C19orf47Q8N9M1 422 aaKnown RBP12.32□□□□□ -0.44
SNED1-205ENST00000405547 A0A0U1RQK1 487 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 MT-ATP6P00846 226 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 SPI1P17947 270 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 OR5M10Q6IEU7 315 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 ULBP2Q9BZM5 246 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 SEMA6CQ9H3T2 930 aa12.32□□□□□ -0.44
SNED1-205ENST00000405547 TRIM64BA6NI03 449 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 TMEM127O75204 238 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 BLVRBP30043 206 aaPredicted RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 ZNF133P52736 654 aaPredicted RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 MEP1BQ16820 701 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 PRSS35Q8N3Z0 413 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 IL1F10Q8WWZ1 152 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 MSI2Q96DH6 328 aaKnown RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 MED18Q9BUE0 208 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 NCDNQ9UBB6 729 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 ZNF223Q9UK11 482 aaPredicted RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 CHRM2P08172 466 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 CPT2P23786 658 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 CTF1Q16619 201 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 SLC5A10A0PJK1 596 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 CDC14CA4D256 554 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 ITGB2P05107 769 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 SLC6A11P48066 632 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 SRP9P49458 86 aaKnown RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 ZNF620Q6ZNG0 422 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 PCNPQ8WW12 178 aaKnown RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 LCORQ96JN0 433 aaPredicted RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 SLC6A18Q96N87 628 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 OR52A5Q9H2C5 316 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 FBXL4Q9UKA2 621 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 MRPS28Q9Y2Q9 187 aaKnown RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 MDC1Q14676 2089 aaKnown RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 SIX6O95475 246 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 ERV3-1Q14264 604 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 HYAL4Q2M3T9 481 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 EMC4Q5J8M3 183 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 PRSS45Q7RTY3 260 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 TCTE3Q8IZS6 198 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 GCM1Q9NP62 436 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 CMC2Q9NRP2 79 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 A0A087WUU8 490 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 RACK1P63244 317 aaKnown RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 PDLIM3Q53GG5 364 aaPredicted RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 TMEM201Q5SNT2 666 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNED1-205ENST00000405547 EXOSC3Q9NQT5 275 aaKnown RBP12.31□□□□□ -0.44
SNED1-205ENST00000405547 UTS2O95399 124 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 FAM3CQ92520 227 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 IKZF5Q9H5V7 419 aa12.31□□□□□ -0.44
SNED1-205ENST00000405547 TRBV11-1A0A0K0K1C0 115 aa12.3□□□□□ -0.44
SNED1-205ENST00000405547 AIPO00170 330 aa12.3□□□□□ -0.44
SNED1-205ENST00000405547 OR7C1O76099 320 aaPredicted RBP12.3□□□□□ -0.44
SNED1-205ENST00000405547 ADRB1P08588 477 aa12.3□□□□□ -0.44
SNED1-205ENST00000405547 PRPH2P23942 346 aa12.3□□□□□ -0.44
SNED1-205ENST00000405547 MRPL19P49406 292 aaKnown RBP12.3□□□□□ -0.44
SNED1-205ENST00000405547 OR51S1Q8NGJ8 323 aa12.3□□□□□ -0.44
SNED1-205ENST00000405547 PIGCQ92535 297 aa12.3□□□□□ -0.44
SNED1-205ENST00000405547 DUSP23Q9BVJ7 150 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms