RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ZNF169Q14929 603 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 ETFDHQ16134 617 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 OR2G6Q5TZ20 316 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 FOXB2Q5VYV0 432 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 INO80CQ6PI98 192 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 TRILQ7L0X0 811 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CHMP1BQ7LBR1 199 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ADCK1Q86TW2 530 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ERI1Q8IV48 349 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 WDFY1Q8IWB7 410 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 OR2T4Q8NH00 348 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 NSMAFQ92636 917 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 KISS1RQ969F8 398 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 OXGR1Q96P68 337 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 OR5M11Q96RB7 305 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 NAA11Q9BSU3 229 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 ALG12Q9BV10 488 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TIGARQ9NQ88 270 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 DIMT1Q9UNQ2 313 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 MRPS18CQ9Y3D5 142 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 NOX1Q9Y5S8 564 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TRGV5A0A0B4J1U4 118 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 A0A1W2PNV4 684 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 DAPL1A0PJW8 107 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 IRGMA1A4Y4 181 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SLC22A23A1A5C7 686 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CCDC182A6NF36 153 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CDK2AP1O14519 115 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SMAD9O15198 467 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 WISP2O76076 250 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SBK2P0C263 348 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CTLA4P16410 223 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SLC2A5P22732 501 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 RPS27P42677 84 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 LHX2P50458 406 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 GP2P55259 537 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 CLRN1P58418 232 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 H3F3AP84243 136 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ZP4Q12836 540 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TBCEQ15813 527 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 TIGD6Q17RP2 521 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 PDSS1Q5T2R2 415 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ARMC4Q5T2S8 1044 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 MEIOBQ8N635 442 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ZNF519Q8TB69 540 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ABHD3Q8WU67 409 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ASB10Q8WXI3 467 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 GATAD2BQ8WXI9 593 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 MUL1Q969V5 352 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SIGLEC11Q96RL6 698 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CNN2Q99439 309 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 DDOQ99489 341 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CDCA4Q9BXL8 241 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 PRRG4Q9BZD6 226 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 NMNAT2Q9BZQ4 307 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ADGRL4Q9HBW9 690 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 PCDHGA9Q9Y5G4 932 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 DOCK7Q96N67 2140 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 PHF3Q92576 2039 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 A6NIZ1 184 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 LINC01387J3KSC0 135 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 PSMD9O00233 223 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 MAGEB4O15481 346 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 TRAF3IP2O43734 574 aaPredicted RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 MRPS14O60783 128 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 TRMUO75648 421 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 IGHG1P01857 330 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 FAM87AP0C7U9 286 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CD79BP40259 229 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CLDN18P56856 261 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TMPRSS3P57727 454 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 RAP1BP61224 184 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 RPS3AP61247 264 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 RAP1AP62834 184 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SPHARQ15513 63 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TBR1Q16650 682 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 HYAL4Q2M3T9 481 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ARMCX4Q5H9R4 360 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 LCN1P1Q5VSP4 162 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 VASNQ6EMK4 673 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 FCRLAQ7L513 359 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 ACBD7Q8N6N7 88 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 OR9K2Q8NGE7 335 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 NEIL3Q8TAT5 605 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 FNDC9Q8TBE3 224 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ZNF385AQ96PM9 386 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 RBP7Q96R05 134 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TAAR6Q96RI8 345 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 ARHGAP9Q9BRR9 750 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 MND1Q9BWT6 205 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 NAA50Q9GZZ1 169 aaKnown RBP3.31□□□□□ -1.88
RTN4-208ENST00000404909 ACKR4Q9NPB9 350 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 B9D1Q9UPM9 204 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 CAMK2AQ9UQM7 478 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 RASD1Q9Y272 281 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 TP53TG5Q9Y2B4 290 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 PCDHGB1Q9Y5G3 927 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 COL6A6A6NMZ7 2263 aa3.31□□□□□ -1.88
RTN4-208ENST00000404909 SMIM31A0A1B0GVY4 71 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms