RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 F13BP05160 661 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 THBS4P35443 961 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 RBM34P42696 430 aaKnown RBP11.54□□□□□ -0.56
SDF4-203ENST00000403997 UGT2B15P54855 530 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 LIPEQ05469 1076 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 KRTAP1-1Q07627 177 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 GSG1Q2KHT4 349 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 ZNF627Q7L945 461 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 SLC46A3Q7Z3Q1 461 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 NUP37Q8NFH4 326 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 LZICQ8WZA0 190 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 FAM168AQ92567 244 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 SGTBQ96EQ0 304 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 VRK1Q99986 396 aaPredicted RBP11.54□□□□□ -0.56
SDF4-203ENST00000403997 ELAC2Q9BQ52 826 aaKnown RBP11.54□□□□□ -0.56
SDF4-203ENST00000403997 EFCAB1Q9HAE3 211 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 GMPR2Q9P2T1 348 aaKnown RBP11.54□□□□□ -0.56
SDF4-203ENST00000403997 MED31Q9Y3C7 131 aa11.54□□□□□ -0.56
SDF4-203ENST00000403997 A0A1W2PRG6 482 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 MCIDASD6RGH6 385 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 DHHO43323 396 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 ATP8B1O43520 1251 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 PDE5AO76074 875 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 THRBP10828 461 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 IFNA8P32881 189 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 AQP2P41181 271 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 YAP1P46937 504 aaKnown RBP11.53□□□□□ -0.56
SDF4-203ENST00000403997 PTDSS1P48651 473 aaKnown RBP11.53□□□□□ -0.56
SDF4-203ENST00000403997 CLRN1P58418 232 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 RAB1AP62820 205 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 RPL18Q07020 188 aaKnown RBP11.53□□□□□ -0.56
SDF4-203ENST00000403997 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 EFNB3Q15768 340 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 LRFN4Q6PJG9 635 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 PIWIL3Q7Z3Z3 882 aaKnown RBP11.53□□□□□ -0.56
SDF4-203ENST00000403997 SPATA21Q7Z572 469 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 MS4A3Q96HJ5 214 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 HOPXQ9BPY8 73 aaPredicted RBP11.53□□□□□ -0.56
SDF4-203ENST00000403997 PLK3Q9H4B4 646 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 ZNF442Q9H7R0 627 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 INIPQ9NRY2 104 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 C20orf141Q9NUB4 165 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 FKBP7Q9Y680 259 aa11.53□□□□□ -0.56
SDF4-203ENST00000403997 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
SDF4-203ENST00000403997 SH3PXD2BA1X283 911 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 hCG_2039718K7EN88 272 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 ENTPD5O75356 428 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 UBL3O95164 117 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 RAB36O95755 333 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 ZNF682O95780 498 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 IGHG1P01857 330 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 QDPRP09417 244 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 CSF3P09919 207 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 PATE4P0C8F1 98 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 PGA4P0DJD7 388 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 PGA3P0DJD8 388 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 OR8G3PP0DMU2 310 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 SLC25A16P16260 332 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 NPR2P20594 1047 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 GIPRP48546 466 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 SLC7A2P52569 658 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 SNTB2Q13425 540 aaKnown RBP11.52□□□□□ -0.57
SDF4-203ENST00000403997 DAG1Q14118 895 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 LAPTM4AQ15012 233 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 FKBP9P1Q75LS8 142 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 VTCN1Q7Z7D3 282 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 TREML1Q86YW5 311 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 SKA3Q8IX90 412 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 SLC22A24Q8N4F4 322 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 ANKS4BQ8N8V4 417 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 SORCS2Q96PQ0 1159 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 FNDC11Q9BVV2 318 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 DENND2DQ9H6A0 471 aaPredicted RBP11.52□□□□□ -0.57
SDF4-203ENST00000403997 NOX3Q9HBY0 568 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 YAE1D1Q9NRH1 226 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 SPEF1Q9Y4P9 236 aa11.52□□□□□ -0.57
SDF4-203ENST00000403997 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 CXCR6O00574 342 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 NME4O00746 187 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 CD5LO43866 347 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 GPRIN2O60269 458 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 IGF2P01344 180 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 ACADSP16219 412 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 ZNF14P17017 642 aaPredicted RBP11.51□□□□□ -0.57
SDF4-203ENST00000403997 NR4A1P22736 598 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 PDLIM4P50479 330 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 NUDT2P50583 147 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 DAP3P51398 398 aaKnown RBP11.51□□□□□ -0.57
SDF4-203ENST00000403997 SEC24CP53992 1094 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 MYBPC1Q00872 1141 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 RUNX1T1Q06455 604 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 RAB39AQ14964 217 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 CARTPTQ16568 116 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 HDDC2Q7Z4H3 204 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 SVOPLQ8N434 492 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 SYT14Q8NB59 555 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 MOSPD2Q8NHP6 518 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 FGFBP3Q8TAT2 258 aa11.51□□□□□ -0.57
SDF4-203ENST00000403997 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms