RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ZNF808Q8N4W9 903 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 SYT14Q8NB59 555 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 NRG4Q8WWG1 115 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 HDAC2Q92769 488 aaKnown RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ZNF837Q96EG3 531 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-204ENST00000401473 USE1Q9NZ43 259 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 GRHPRQ9UBQ7 328 aa14.08□□□□□ -0.16
HMGA1-204ENST00000401473 ANKHD1Q8IWZ3 2542 aaKnown RBP14.07□□□□□ -0.16
HMGA1-204ENST00000401473 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 CELSR2Q9HCU4 2923 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 FAM90A27PA6NNH2 459 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 DLGAP1O14490 977 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 ARPC3O15145 178 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 TRMUO75648 421 aaKnown RBP14.07□□□□□ -0.16
HMGA1-204ENST00000401473 TXNDC12O95881 172 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 PGA4P0DJD7 388 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 PGA3P0DJD8 388 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 ACADSP16219 412 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 SDHAP31040 664 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 ACVR1BP36896 505 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 DAP3P51398 398 aaKnown RBP14.07□□□□□ -0.16
HMGA1-204ENST00000401473 CDK5Q00535 292 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 PTGES3Q15185 160 aaKnown RBP14.07□□□□□ -0.16
HMGA1-204ENST00000401473 TAF11Q15544 211 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 HIST3H3Q16695 136 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 MESTQ5EB52 335 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 SLC35F1Q5T1Q4 408 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 FBXW9Q5XUX1 488 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 PTCHD4Q6ZW05 846 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 GABRG1Q8N1C3 465 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 IQCF1Q8N6M8 205 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 DNAJC9Q8WXX5 260 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 ZNF566Q969W8 418 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 KCNK17Q96T54 332 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 SLCO5A1Q9H2Y9 848 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 PIGMQ9H3S5 423 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 TBC1D23Q9NUY8 699 aa14.07□□□□□ -0.16
HMGA1-204ENST00000401473 NBPF19A0A087WUL8 3843 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 TEX13CA0A0J9YWL9 993 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 ARHGEF9O43307 516 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 ATP6V1G2O95670 118 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 APEHP13798 732 aaKnown RBP14.06□□□□□ -0.16
HMGA1-204ENST00000401473 HIST1H1CP16403 213 aaKnown RBP14.06□□□□□ -0.16
HMGA1-204ENST00000401473 CDKN2AP42771 156 aaKnown RBP14.06□□□□□ -0.16
HMGA1-204ENST00000401473 CRISP1P54107 249 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 TFF3Q07654 80 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 FAPQ12884 760 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 OGFRL1Q5TC84 451 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-204ENST00000401473 LRFN4Q6PJG9 635 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 C20orf196Q8IYI0 205 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 LNX2Q8N448 690 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 OR52L1Q8NGH7 329 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 LRR1Q96L50 414 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 ADAD1Q96M93 576 aaKnown RBP14.06□□□□□ -0.16
HMGA1-204ENST00000401473 MALT1Q9UDY8 824 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 H7C1C5 153 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 M0R3G1 203 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 SLC43A1O75387 559 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 CLDN14O95500 239 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 GRNP28799 593 aaKnown RBP14.06□□□□□ -0.16
HMGA1-204ENST00000401473 RPS6KA3P51812 740 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 LCN6P62502 163 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 FAM27E3Q08E93 113 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 NPRL3Q12980 569 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 GINS1Q14691 196 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 SLC25A35Q3KQZ1 300 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 ZIK1Q3SY52 487 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-204ENST00000401473 Q6ZT83 130 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 UBE2J2Q8N2K1 259 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 GALNT4Q8N4A0 578 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 OR2T33Q8NG76 320 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 ZNF570Q96NI8 536 aa14.06□□□□□ -0.16
HMGA1-204ENST00000401473 ALKBH3Q96Q83 286 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-204ENST00000401473 FLNBO75369 2602 aaKnown RBP14.05□□□□□ -0.16
HMGA1-204ENST00000401473 IGKV1D-43A0A0B4J1Z2 117 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 SLC2A10O95528 541 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 NOS3P29474 1203 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 ESRRGP62508 458 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 MYBPC1Q00872 1141 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 GPR139Q6DWJ6 353 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 SLC27A4Q6P1M0 643 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 OR4K13Q8NH42 304 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 TEX47Q8TBZ9 253 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 TMEM54Q969K7 222 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 NMD3Q96D46 503 aaKnown RBP14.05□□□□□ -0.16
HMGA1-204ENST00000401473 DDOQ99489 341 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 LINC00470Q9BZP3 86 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 CRLF2Q9HC73 371 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 KCNJ16Q9NPI9 418 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 ASB6Q9NWX5 421 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 GLTPQ9NZD2 209 aa14.05□□□□□ -0.16
HMGA1-204ENST00000401473 AKAP8O43823 692 aaKnown RBP14.04□□□□□ -0.16
HMGA1-204ENST00000401473 IDH3BO43837 385 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 CNOT4O95628 575 aaKnown RBP14.04□□□□□ -0.16
HMGA1-204ENST00000401473 SNAP29O95721 258 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 IGHG1P01857 330 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 IGHV1-2P23083 117 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 TSC22D1Q15714 1073 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 C9orf135Q5VTT2 229 aa14.04□□□□□ -0.16
HMGA1-204ENST00000401473 BEND4Q6ZU67 534 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms