RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 GPM6BQ13491 265 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 USP53Q70EK8 1073 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ZNF440Q8IYI8 595 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MUC20Q8N307 709 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 FOXRED1Q96CU9 486 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ZNF768Q9H5H4 540 aaKnown RBP10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 CHMP1AQ9HD42 196 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MEMO1Q9Y316 297 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 WDR90Q96KV7 1748 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 TEX13DA0A0J9YY54 714 aaPredicted RBP10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 A0A1B0GV50 99 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR2W5A6NFC9 320 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SIGLEC5O15389 551 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 GNRH1P01148 92 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 HTR2CP28335 458 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SIGLEC14Q08ET2 396 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SLC25A24Q6NUK1 477 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 C3orf33Q6P1S2 294 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 DNM1P34Q6PK57 102 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 LRRC69Q6ZNQ3 347 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 PATE1Q8WXA2 126 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 FOXJ3Q9UPW0 622 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 LOC285556D6RIA3 1793 aa10.17□□□□□ -0.78
CSGALNACT1-202ENST00000397998 CXorf51AA0A1B0GTR3 108 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 POM121BA6NF01 834 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR5H14A6NHG9 310 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 H0Y8X5 98 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 PHYHO14832 338 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SEC14L5O43304 696 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ZNF208O43345 1280 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 KLF8O95600 359 aaPredicted RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 PMS2P2O95744 297 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ITGA5P08648 1049 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 TPT1P13693 172 aaKnown RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 UBE2IP63279 158 aaKnown RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 WDR88Q6ZMY6 472 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SLC16A9Q7RTY1 509 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MAMDC2Q7Z304 686 aaPredicted RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 DND1Q8IYX4 353 aaKnown RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR10R2Q8NGX6 335 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR2AJ1Q8NGZ0 328 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MARC2Q969Z3 335 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 STACQ99469 402 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 WDR76Q9H967 626 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SLC22A7Q9Y694 548 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ZSWIM8A7E2V4 1837 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MEGF11A6BM72 1044 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR6C68A6NDL8 312 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 CXCL10P02778 98 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ZNF14P17017 642 aaPredicted RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 CXCL2P19875 107 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MAOBP27338 520 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 RAB5BP61020 215 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 CHAF1BQ13112 559 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SMAD2Q15796 467 aaKnown RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SLC35D3Q5M8T2 416 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 WBP2NLQ6ICG8 309 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 LILRA6Q6PI73 481 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 PRSS41Q7RTY9 318 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR51Q1Q8NH59 317 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 FAM3CQ92520 227 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 PRRT1Q99946 306 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 DNTTIP1Q9H147 329 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 FBXO4Q9UKT5 387 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 HHLA2Q9UM44 414 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 TMEM235A6NFC5 223 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 GGT3PA6NGU5 568 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 LDOC1O95751 146 aaPredicted RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MPIG6BO95866 241 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 KRBOX4Q5JUW0 171 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 GABRG1Q8N1C3 465 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR2L13Q8N349 312 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR11G2Q8NGC1 345 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 CD300LFQ8TDQ1 290 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 HSD17B8Q92506 261 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 FAM83CQ9BQN1 747 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 TMEM231Q9H6L2 316 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SLC22A13Q9Y226 551 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 BRINP1O60477 761 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 CBX7O95931 251 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 IL5P05113 134 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 CEACAM5P06731 702 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 TACR3P29371 465 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ZNF136P52737 540 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 SLC9A3R2Q15599 337 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 C2orf76Q3KRA6 126 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ZNF626Q68DY1 528 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 AWAT2Q6E213 333 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MRM1Q6IN84 353 aaKnown RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 PWWP2BQ6NUJ5 590 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ZFP82Q8N141 532 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 NAXEQ8NCW5 288 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR14A16Q8NHC5 309 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 C2CD4CQ8TF44 421 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 THAP3Q8WTV1 239 aaPredicted RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 OR1E3Q8WZA6 343 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 LMF2Q9BU23 707 aaKnown RBP10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 MOKQ9UQ07 419 aa10.16□□□□□ -0.78
CSGALNACT1-202ENST00000397998 ARPC4-TTLL3A0A0A6YYG9 625 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms