RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 UCHL1P09936 223 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SBK2P0C263 348 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 CCL3P10147 92 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SFTPCP11686 197 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SPI1P17947 270 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 POU3F4P49335 361 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ROR2Q01974 943 aaKnown RBP7.49□□□□□ -1.21
PTPRD-204ENST00000397606 MZT1Q08AG7 82 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ECH1Q13011 328 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 PAQR6Q6TCH4 344 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 FAM198BQ6UWH4 519 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ARSKQ6UWY0 536 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 PXKQ7Z7A4 578 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SETD6Q8TBK2 473 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SLC25A44Q96H78 314 aaPredicted RBP7.49□□□□□ -1.21
PTPRD-204ENST00000397606 TRGV8A0A0C4DH27 118 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SMIM30A4D0T7 59 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SNPHO15079 494 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 NKX2-8O15522 239 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 LRRTM2O43300 516 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ADH7P40394 386 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 STARP49675 285 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 RGS6P49758 472 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 MVDP53602 400 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 CDC20Q12834 499 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SKP2Q13309 424 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 MADCAM1Q13477 382 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 RNPS1Q15287 305 aaKnown RBP7.49□□□□□ -1.21
PTPRD-204ENST00000397606 OR2G6Q5TZ20 316 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 LIN54Q6MZP7 749 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 C10orf111Q8N326 155 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 FAM109AQ8N4B1 249 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SIMC1Q8NDZ2 872 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 TAAR8Q969N4 342 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SIGLEC7Q9Y286 467 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 CMAHPQ9Y471 501 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 PLSCR5A0PG75 271 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM212A6NML5 194 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 DHFRP00374 187 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 IGHV3-9P01782 118 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 PIPP12273 146 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 IRF2P14316 349 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 NPR2P20594 1047 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 THBS2P35442 1172 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 CD97P48960 835 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 GRB2P62993 217 aaKnown RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 MFAP5Q13361 173 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 MEP1BQ16820 701 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 ACSM3Q53FZ2 586 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 LRRC17Q8N6Y2 441 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 SAMD12Q8N8I0 201 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 OR52N1Q8NH53 320 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 ROBO4Q8WZ75 1007 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 BORCS8Q96FH0 119 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM138Q9NPI0 162 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 MEPEQ9NQ76 525 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 MRPL39Q9NYK5 338 aaKnown RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 LUZP4Q9P127 313 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 ING4Q9UNL4 249 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF281Q9Y2X9 895 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 OR2M5A3KFT3 312 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 PRR19A6NJB7 356 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 ABHD16AO95870 558 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 SP1P08047 785 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 COX6A1P12074 109 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 APEHP13798 732 aaKnown RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 LIFP15018 202 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 RAB3AP20336 220 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 RIN1Q13671 783 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 RAB11BQ15907 218 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 TMPRSS7Q7RTY8 843 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 BCDIN3DQ7Z5W3 292 aaKnown RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 LINC00346Q8IVM7 164 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 OR52I1Q8NGK6 324 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 UBE2FQ969M7 185 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 SLC30A2Q9BRI3 323 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF71Q9NQZ8 489 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 PLCXD1Q9NUJ7 323 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 KCNG2Q9UJ96 466 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 MRPS18BQ9Y676 258 aaKnown RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 ASCC3Q8N3C0 2202 aaKnown RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 IGHV3-15A0A0B4J1V0 119 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 hCG_1807616A0A1W2PRN6 198 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 ARPC3O15145 178 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 SURF4O15260 269 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 RLN1P04808 185 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 SLC2A2P11168 524 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 C4BPBP20851 252 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 LAP3P28838 519 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 PTGS2P35354 604 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 TMPRSS3P57727 454 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 PCOLCEQ15113 449 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 PRSS53Q2L4Q9 553 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 CD300LDQ6UXZ3 194 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 FAM57BQ71RH2 274 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM17Q86X19 198 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 GTPBP8Q8N3Z3 284 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-204ENST00000397606 COG8Q96MW5 612 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 MRI1Q9BV20 369 aa7.48□□□□□ -1.21
PTPRD-204ENST00000397606 IL17BQ9UHF5 180 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms